Joint Annual
Meeting ISMRM-ESMRMB 2014
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10-16 May 2014
○
Milan, Italy |
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ELECTRONIC
POSTER SESSION ○ PULSE SEQUENCES & RECONSTRUCTION |
Pulse Sequences & Contrast Mechanisms
Wednesday 14 May 2014
Exhibition Hall |
10:00 - 11:00 |
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Computer # |
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4220. |
1 |
Frequency encoding by
Bloch-Siegert shift
Zhipeng Cao1,2, Eduard Y. Chekmenev1,
and William A. Grissom1,2
1Institute of Imaging Science, Vanderbilt
University, Nashville, TN, United States, 2Biomedical
Engineering, Vanderbilt University, Nashville, TN,
United States
The theory of Bloch-Seigert based RF frequency encoding
is presented with a proposed pulse sequence and
subsequent signal expression. They are validated by
Bloch simulation and a non-linear image reconstruction
as an initial demonstration.
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4221.
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2 |
Rotation Angle Optimization
for a K-space Segmented 4D Radial Stack-of-Stars Acquisition
Keigo Kawaji1, Mehmet Akçakaya1,
Sébastien Roujol1, Warren J Manning1,2,
and Reza Nezafat1
1Medicine, Beth Israel Deaconess Medical
Center and Harvard Medical School, Boston,
Massachusetts, United States, 2Radiology,
Beth Israel Deaconess Medical Center and Harvard Medical
School, MA, United States
Golden angle interleaving of radial k-space lines can be
incorporated into 3D coronary MRI, so that a large
acquisition window can be acquired for retrospective
reconstructions of any window subset with minimal
cardiac motion. To enable such reconstructions with
minimal artifacts, uniform distribution of the radial
lines becomes desirable, but this coverage is dependent
on parameters such as the rotation angle and acquisition
window size. We present an approach to determine the
optimal rotation angle so that the radial spokes are
evenly distributed for any subset of the acquisition
window in a 3D radial stack-of-stars coronary MRI
sequence.
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4222. |
3 |
Simultaneous Use of Linear
and Nonlinear Gradients as Independent K-Space Variables for
RF Excitation
Koray Ertan1,2 and
Ergin Atalar1,2
1Department of Electrical and Electronics
Engineering, Bilkent University, Ankara, Turkey, 2National
Magnetic Resonance Research Center (UMRAM), Ankara,
Turkey
Effect of nonlinear gradients on the RF excitation
profile is formulated by using independent k-space
variables. During pulse design, target excitation
profiles can be calculated in order to eliminate the
effect of B1 inhomogeneity. Use of independent k-space
variable for nonlinear gradients leads to design
technique for optimally combining linear gradients and
nonlinear gradients. Optimizations have been performed
in order to achieve target excitation profile. An
example case demonstrates that simultaneous use of
linear gradients and nonlinear gradients can achieve
more accurate excitation profile in comparison with the
only linear or only nonlinear gradients.
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4223. |
4 |
Accelerated post-processing
of MR fingerprinting data using partial signal library
construction
Akash P. Kansagra1 and
Christopher P. Hess1
1Radiology and Biomedical Imaging, University
of California, San Francisco, San Francisco, CA, United
States
MR fingerprinting is based on the application of a
pseudorandom pulse sequence to a tissue of interest and
comparing the resulting signal to a large library of
simulated signals corresponding to a variety of T1, T2,
and resonance offsets. Computing this library is
computationally expensive. Here, we outline a
simultaneous simulation-matching algorithm that allows
partial construction of the signal library. Using this
method, we demonstrate increases in execution speed
nearing two orders of magnitude. The algorithm described
is a simple and straightforward means to accelerate the
post-processing portion of the MR fingerprinting method.
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4224. |
5 |
Rangoli Undersampling
Library (RUSL) for k-space trajectory design to combine
compressed sensing and parallel imaging for accelerated MRI
Amaresha Shridhar Konar1, Smera Lingesh1,
Ramesh Babu1, and Sairam Geethanath1
1Medical Imaging Research Center, Dayananda
Sagar Institutions, Bangalore, karnataka, India
The current work provides a framework for undersampling
patterns for the combination of compressed sensing and
parallel imaging. The masks considered for this work are
called “Rangoli”. These masks have pseudo-random
distribution of points on Cartesian grid and are
smoothly connected. In this work, a variable density
spiral was plotted on rangoli and was tweaked by mapping
spiral coordinates on to the nearest rangoli coordinates
balancing consistency and smoothness error factors to
obtain the final trajectory. The images were then
evaluated based on the Point spread function (PSF) where
PSF was undersampled at different acceleration factors
and quantified by peak-signal-to-noise-ratio.
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4225. |
6 |
3D Compressed Sensing CPMG
with Group-Sparse Reconstruction for Myelin Water Imaging
Henry Szu-Meng Chen1,2, Angshul Majundar3,
and Piotr Kozlowski4
1UBC MRI Research Centre, Vancouver, British
Columbia, Canada, 2Physics
and Astronomy, University of British Columbia,
Vancouver, BC, Canada,3Indraprastha Institute
of Informatino Technology, New Delha, DL, India, 4Radiology,
University of British Columbia, Vancouver, BC, Canada
Myelin water imaging using CPMG sequence is slow, which
is especially a concern in in
vivo cases.
Compressed sensing 3D CPMG experiments were performed on ex
vivo cervical
spinal cord sample using a variable density sampling
scheme in the two phase encode directions. It was found
that while the T2 weighted echo images were accurately
reconstructed at 3x and 2x acceleration, the 3x
accelerated myelin water fraction maps showed higher
reading than the fully sampled reference dataset. The 2x
accelerated scan did not have this issue.
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4226. |
7 |
Fiber Tractography Using
Slice Accelerated High-Angular-Resolution Diffusion Imaging
Zhaoying Han1, Eric Peterson1,
Sjoerd B. Vos1,2, Rafael O'Halloran1,
Samantha Holdsworth1, Eric Aboussouan1,
Nancy Fischbein1, and Roland Bammer1
1Radiology, Stanford University, Stanford,
California, United States, 2Image
Sciences Institute, University Medical Center Utrecht,
Utrecht, Netherlands
Slice accelerated (multiband) DTI shows great potential
for reducing scan times of lengthy acquisitions.
Multiband imaging can provide significant time saving in
long scans, such as high angular diffusion resolution
imaging (HARDI) acquisition. DTI-based tractography
seeded in the corpus callosum on the mid-sagittal slice
were performed, showing comparable results for
accelerated HARDI. This study shows that slice
accelerations of 2-3 can be used to reduce the otherwise
long scan time of HARDI to clinically feasible times,
without losing image quality.
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4227. |
8 |
Performance of Multiple
Types of Numerical MR Simulation using MRiLab
Fang Liu1, Richard Kijowski2, and
Wally Block1,3
1Department of Medical Physics, University of
Wisconsin-Madison, Madison, Wisconsin, United States, 2Department
of Radiology, University of Wisconsin-Madison,
Wisconsin, United States, 3Department
of Biomedical Engineering, University of
Wisconsin-Madison, madison, Wisconsin, United States
Digital simulation dramatically facilitates the
understanding and development of new MR imaging methods.
In this work, we optimized and improved our proposed
fast 3D parallel numerical MR simulation package 'MRiLab'
for incorporating many new challenging simulation
features including multiple RF transmitting and
receiving, motion simulation, etc. The spin model is
also extended to include multiple exchanging spin
compartments to create more realistic MR signal for
certain types of tissues with, for instance,
magnetization transfer (MT) modulation. This abstract
was aimed to demonstrate the feasibility of using MRiLab
for studying multiple types of MR experiments that
remain challenging for numerical simulation.
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4228. |
9 |
Tissue-specific Variable
Flip Angle of 3D Turbo-Spin Echo on 3.0T system: Optimized
with Individual T1 and T2 value for Prostate.
Katsusuke Kyotani1, Yoshiko Ueno2,
Satoru Takahashi2, Yu Ueda1,
Tomoyuki Okuaki3, Nobukazu Aoyama1,
Kazuhiro Kitajima2, Hideaki Kawamitsu1,
and Kazuro Sugimura2
1Division of Radiology, Kobe University
Hospital, Kobe, Hyogo, Japan, 2Department
of Radiology, Kobe University Graduate School of
Medicine, Kobe, Hyogo, Japan, 3Philips
healthcare Asia pacific, Minato-ku, Tokyo, Japan
Our aim was to evaluate the usefulness of
tissue-specific VRFA 3D-TSE optimized with measured T1
and T2 values of prostate gland comparing to standard
3D-TSE for T2W imaging. Contrast ratio between PZ and PZ
cancer of the tissue-specific VRFA 3D T2W-TSE was
significantly higher than that of standard 3D T2W-TSE (P
< 0.05). Contrast ratio between PZ and TZ of the
tissue-specific VRFA 3D T2W-TSE was significantly higher
than that of standard 3D T2W-TSE (P < 0.05). Spatial
resolution ratio of tissue-specific VRFA 3D-TSE was
improved from standard 3D-TSE (P < 0.05)
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4229. |
10 |
A flexible reduced field of
view imaging scheme for single-shot spatiotemporally encoded
MRI
Jing Li1, Shuhui Cai1, Congbo Cai2,
and Zhong Chen1
1Department of Electronic Science, Xiamen
University, Xiamen, Fujian, China, 2Department
of Communication Engineering, Xiamen University, Xiamen,
Fujian, China
Immunity to field perturbation, spatial resolution and
signal-to-noise ratio (SNR) are three significant
factors needed to concern in MRI. Recently, a
spatiotemporally encoded (SPEN) imaging approach based
on linear frequency-swept excitation has been proposed
to overcome the artifacts induced by various field
perturbations. To demonstrate the superiority of SPEN
imaging approach in reduced field of view (rFOV)
imaging, a flexible rFOV imaging approach is proposed in
this paper. Experiments on phantom and in vivo rat brain
show that the flexible rFOV scheme can produce images
with higher SNR and spatial resolution. Meanwhile, the
regions of interest can be flexibly imaged.
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4230. |
11 |
Reduced scan time 3D FLAIR
using modulated repetition and inversion time
Neville Gai1 and
John Butman1
1Radiology & Imaging Sciences, NIH, Bethesda,
Maryland, United States
3D FLAIR imaging of the entire brain using an extended
modulated refocusing pulse train is now possible within
a clinically reasonable time. However, a longer
repetition time (with dead time) is still used to allow
for adequate signal recovery. We describe a technique
which uses variable repetition and inversion time to
reduce total scan time. The scan time is reduced
considerably while maintaining near equal SNR and CNR
when compared with the constant repetition time
sequence.
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4231. |
12 |
Biventricular strain
analysis at 1.5T and 3.0T cardiac MR imaging: a comparison
of derived strain values by field strength and temporal
resolution.
Peter Mark Smith1, Benjamin Freed2,
B. D. Allen1, Bruce S Spottiswoode3,
M. Carr1, Karissa Fortney-Campione1,
Marie-Pierre Jolly4, Christoph Guetter4,
James C Carr1, and Jeremy D Collins1
1Radiology, Northwestern University, Chicago,
IL, United States, 2Cardiology,
Northwestern University, Chicago, IL, United States, 3Cardiovascular
R & D, Siemens Healthcare, Chicago, IL, United States, 4Imaging
and Computer Vision, Corporate Technology, Siemens
Corporation, Princeton, NJ, United States
Myocardial strain may be useful to evaluate early
alterations in myocardial structure-function.
Deformation field analysis now enables myocardial strain
calculation from balanced steady state free precession
(bSSFP) cine images. However, the influence of field
strength and temporal resolution on strain parameters is
unknown. We compared strains from bSSFP cine images at
1.5 T and 3T across a range of temporal resolutions
(12.5 to 39.2 msec). There was no significant influence
of field strength or temporal resolution on RV
longitudinal or LV radial, circumferential, or
longitudinal global strain. Our results suggest that
myocardial strain can be calculated from routine bSSFP
sequences.
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4232. |
13 |
Improved myocardial
contrast using novel complementary radial MR tagging
technique
Zhe Wang1,2, A. Nasiraei Moghaddam2,3,
Yunpeng Zou4, Subashini Srinivasan1,2,
J.Paul Finn2,5, and Daniel B. Ennis1,2
1Department of Bioengineering, University of
California, Los Angeles, CA, United States, 2Department
of Radiological Science, University of California, Los
Angeles, CA, United States, 3Department
of Biomedical Engineering, Amirkabir University of
Technology, Tehran, Iran, 44.
Sino-Dutch Biomedical and Information Engineering
School, Northeastern University, Shenyang, Liaoning,
China, 5Biomedical
Physics Interdepartmental Program, University of
California, Los Angeles, CA, United States
Complementary radial tagging (CRT) generates radial tags
with enhanced contrast throughout the entire cardiac
cycle. CRT is potentially useful for measuring left
ventricular (LV) contraction and torsion especially
during late systole and early to late diastole. The
previous CRT method was validated to work in >92% of
clinic cases, but required a table position shift and
the CRT pattern was non-ideal for some patients. Our
objective was to develop a new CRT method that
incorporates continuous RF phase adjustments to improve
that CRT pattern. The new method generates an excellent
CRT pattern without the need for a table shift.
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4233. |
14 |
Fusion of magnitude and
phase images and its applications in ultra-short TE MR
imaging
Aiming Lu1, Mitsue Miyazaki1,
Cheng Ouyang1, and Xiangzhi Zhou1
1Toshiba Medical Research Institute USA,
Vernon Hills, IL, United States
Phase information is often neglected in MR imaging
except a few applications such as flow quantification
and susceptibility-weighted imaging (SWI).SWI usually
acquires gradient echo images with long TEs to create
susceptibility weighed magnitude images and has found
applications in mainly neuroimaging. More recently,
phase contrasts have been reported in several
ultra-short TE (UTE) imaging applications. It is
demonstrated here that phase images obtained with
ultra-short TEs provide useful contrasts in knee and
lung imaging. A new approach for visualizing both the
magnitude and phase information simultaneously without
information loss is then presented to facilitate the
assessment of tissue characteristics.
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4234. |
15 |
MR Elastography using
SS-SE-EPI with reduced FOV for Kidney: Preliminary Study.
- permission withheld
Masanori Ozaki1, Ken Arai1,
Kunihiro Miyoshi1, Pauline Wong Worters2,
Suchandrima Banerjee2, Arnaud Guidon2,
Hitoshi Ikeda1, and Hiroyuki Kabasawa3
1MR Engineering, GE Healthcare Japan,
Hino-shi, Tokyo, Japan, 2ASL,
GE Healthcare, WI, United States, 3Global
Applications and Workflow, GE Healthcare, Hino-shi,
Tokyo, Japan
Current MRE method offers techniques for diagnosis for
large organs such as liver. Recent papers report that
MRE for kidney could be useful for assessment of renal
fibrosis. However, in the renal MRE, high spatial
resolution is needed because pathologic evaluation is
valid only on the renal cortex which is thin. This study
proposes high spatial resolution MRE using Single Shot �
Spin Echo –Echo Planar Imaging with reduced FOV for
kidney.
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4235. |
16 |
Specificity of the
Inhomogeneous Magnetization Transfer Approach to Myelinated
Tissues
Novena A Rangwala1, Gopal Varma1,
Olivier Girard2, Guillaume Duhamel2,
David B Hackney1, and David C Alsop1
1Department of Radiology, Beth Israel
Deaconess Medical Center and Harvard Medical School,
Boston, Massachusetts, United States, 2CRMBM
UMR 7339, CNRS / Aix-Marseille Université, Marseille,
France
The inhomogeneous magnetization transfer (IHMT) approach
generates images both sensitive and specific to
myelinated tissues, especially white matter (WM). We
investigated the specificity of IHMT to several tissues
and organs not containing myelin. IHMT images were
acquired in cervical and thoracic spine and in the
abdomen; and IHMT ratios (IHMTR) were compared with MT
ratios (MTR) in these tissues. Results showed MTR of
6-27% in different tissues, with MTR ~ 23% in WM. In
contrast, IHMTR demonstrated specificity to
myelin-containing tissues with 5% in WM, < 2% in gray
matter and virtually no IHMTR in other investigated
tissues. IHMT may be a reliable marker for myelin in the
investigation of WM disorders.
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4236. |
17 |
Magnetization Transfer from
Inhomogeneously Broadened Lines (ihMT): Field Strength
Dependency
Olivier M. Girard1, Valentin Prevost1,
Gopal Varma2, David C. Alsop2, and
Guillaume Duhamel1
1CRMBM UMR 7339, CNRS / Aix-Marseille
Université, Marseille, France, 2Radiology
Department, Beth Israel Deaconess Medical Center and
Harvard Medical School, Boston, MA, United States
Inhomogeneous magnetization transfer (ihMT) imaging has
been proposed as a new method for imaging myelinated
tissues of the central nervous system. Previous studies
have been performed at 1.5T and 3T using different MR
systems, and high similarities were observed. In this
work the ihMT contrast is quantified at both field
strengths using the same acquisition protocol and
volunteers to further address the potential field
dependency of the ihMT effect. IhMT datasets were very
consistent and show no field dependency. The ihMT
technique is very robust and experiments may be
performed at various field strengths with similar
contrast properties.
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4237. |
18 |
Magnetization Transfer from
Inhomogeneously Broadened Lines (ihMT): Sequence
Optimization
Olivier M. Girard1, Valentin Prevost1,
Gopal Varma2, David C. Alsop2, and
Guillaume Duhamel1
1CRMBM UMR 7339, CNRS / Aix-Marseille
Université, Marseille, France, 2Radiology
Department, Beth Israel Deaconess Medical Center and
Harvard Medical School, Boston, MA, United States
Inhomogeneous magnetization transfer (ihMT) imaging has
been proposed as a new method for imaging myelinated
tissues of the central nervous system. Previous studies
have shown promising results on both humans and small
animals, at various magnetic field strengths. Various
sequence parameters were used and a better understanding
of the contrast mechanisms is necessary to further
optimize the ihMT effect. Here we characterize the ihMT
contrast with respect to the main sequence parameters of
a pulsed ihMT preparation module at 1.5T. Very useful
information can be derived from presented results in
order to optimize ihMT signal and contrast.
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4238. |
19 |
Evaluation of Dixon based
Soft Tissue and Bone Classification in the Pelvis for MR-only-based
Radiation Therapy Planning
Michael Helle1, Nicole Schadewaldt1,
Marloes Frantzen-Steneker2, Heinrich Schulz1,
Christian Stehning1, Uulke van der Heide2,
and Steffen Renisch1
1Philips Research Laboratories, Hamburg,
Germany, 2Department
of Radiation Oncology, The Netherlands Cancer Institute,
Amsterdam, Netherlands
Radiation therapy planning can benefit from the superior
display of soft tissue contrasts and the delineation of
tumor and critical organs in magnetic resonance imaging.
In this study, an advanced approach on the basis of
Dixon MR techniques with subsequent reconstruction
workflow is introduced for soft tissue and bone
classification in order to generate MR-derived simulated
computed tomography (CT) maps. For the first time, this
method is evaluated in patients with corresponding true
CT data and radiation therapy plans.
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4239. |
20 |
Robust retrobulbar MRA
using BORR pulse for fat suppression
Yongquan Ye1 and
E. Mark Haacke1
1Radiology, Wayne State University, Detroit,
Michigan, United States
MR angiography for retrobulbar ocular vessels has been
limited due to the fact that the vessels are buried in
the excessive fatty tissues around the optical nerves,
which has short T1 and long T2 to show high signals in
most MR images, and thus the vessel-tissue contrast are
low. We proposed using a newly developed technique,
namely Binomial Off-resonant Rectangular (BORR) pulse,
to completely suppress the fat signal. Compared to other
MRA techniques, the BORR method yielded the best
angiography contrast, and has the potential to be used
on very high fields due to the fast scanning speed and
low SAR level.
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4240. |
21 |
Attenuation of Signal from
Multiple Tissue Types with Singleshot Inversion Recovery
Radial Steady State Imaging
Thomas Benkert1, Martin Blaimer1,
Peter M. Jakob2, and Felix A. Breuer1
1Research Center Magnetic Resonance Bavaria (MRB),
Würzburg, Bavaria, Germany, 2Experimental
Physics 5, University of Würzburg, Würzburg, Bavaria,
Germany
Inversion recovery (IR) techniques allow the suppression
of one particular species (e.g. CSF fluid or fat).
However, these techniques have their limitation. A
single inversion time (TI) has to be chosen
prospectively, resulting in only one contrast per IR
experiment. Here, we demonstrate that employing a radial
trajectory in combination with a conventional radial
reconstruction allows the reconstruction of several
images with different tissue types cancelled out of one
singleshot dataset. Thus, no fixed TI is necessary and
the desired contrasts can be chosen retrospectively,
what makes this technique a promising candidate for
clinical practice.
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4241. |
22 |
Methods for Myelin Water
Imaging
Eva Alonso Ortiz1 and
Gilbert Bruce Pike2
1Department of Physics, Medical Physics Unit,
McGill University, Montreal, QC, Canada, 2Department
of Radiology and Hotchkiss Brain Institute, University
of Calgary, Calgary, Alberta, Canada
Multi-component T2 relaxation time measurement in the
central nervous system shows a component that originates
from water trapped in the lipid bilayers of myelin. This
myelin-water component is of significant interest as it
provides a myelin specific MRI signal of value in
assessing myelin changes in cerebral white matter in
vivo. In this educational e-poster the various
acquisition and analysis strategies proposed to date for
myelin water imaging are reviewed and research conducted
into their validity and clinical applicability is
presented. Comparisons between the imaging methods are
made with a discussion regarding potential difficulties
and model limitations.
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4242. |
23 |
Simultaneous measurement of
total water content and myelin water fraction at 3T:
validation in phantoms and results from in vivo human brain
Sandra M. Meyers1, Shannon H. Kolind2,
and Alex L. MacKay1,3
1Physics and Astronomy, University of British
Columbia, Vancouver, BC, Canada, 2Medicine,
University of British Columbia, Vancouver, BC, Canada,3Radiology,
University of British Columbia, Vancouver, BC, Canada
Myelin water imaging based on multi-component T2
relaxation is valuable for investigating neurological
diseases such as multiple sclerosis. Myelin water
fraction correlates strongly with histological staining
for myelin, but is also affected by changes in total
water content; therefore, simultaneous measurement of
the two could be a valuable tool for studying brain
disease processes such as edema and demyelination. We
present a T2 relaxation based technique in which myelin
water fraction and water content are measured
simultaneously at 3T. Water content showed excellent
consistency and accuracy (mean error 1.8%) in phantom
validations and in vivo values were consistent with
literature.
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4243. |
24 |
A method to obtain high
resolution MRS through simultaneous acquisition of iZQC and
iDQC signals under inhomogeneous magnetic fields
Yanqin Lin1, Liandi Zhang1,
Zhiliang Wei1, Liangjie Lin1,
Shuhui Cai1, and Zhong Chen1
1Department of Electronic Science, Xiamen
University, Xiamen, Fujian, China
The inherent heterogeneity of the samples or living
organisms can lead to magnetic field fluctuations and
losses of local homogeneity. Intermolecular multiple
quantum coherences (iMQCs) can be used to obtain high
resolution magnetic resonance spectroscopy (MRS) under
field inhomogeneity. Since iMQC signals are
phase-modulated, absolute value spectra are usually used
for high resolution projection, which introduces
unfavorable line broadening. Here, a pulse sequence is
designed to simultaneously acquire intermolecular zero
quantum coherence (iZQC) and intermolecular double
quantum coherence (iDQC) signals. Double absorption
lineshape is achieved through a combination of iZQC and
iDQC signal, thus doubling the spectral resolution.
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ELECTRONIC
POSTER SESSION ○ PULSE SEQUENCES & RECONSTRUCTION |
K-Space Sampling Trajectories & UTE Pulse Sequences
Wednesday 14 May 2014
Exhibition Hall |
10:00 - 11:00 |
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Computer # |
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4244. |
25 |
O-Space Turbo Spin Echo
Imaging
Haifeng Wang1, Leo Tam1, Emre
Kopanoglu1, Dana Peters1, R. Todd
Constable1, and Gigi Galiana1
1Department of Diagnostic Radiology, Yale
University, New Haven, CT, United States
Recently, a developed approach to faster imaging has
been spatial encoding with nonlinear magnetic fields,
such as, PatLoc, O-Space, Null Space, 4D-RIO, etc. But,
these efforts have focused on gradient echo imaging.
Otherwise, Turbo Spin Echo (TSE) sequences provide much
faster scan time than standard spin echo sequences. In
this abstract, we demonstrate a hybrid of TSE and
O-Space, developing an O-Space TSE sequence which is
much faster than single echo O-Space imaging. Various
techniques are applied to overcome the problems of
artifacts and ambiguous T2 weighting. Simulations and
experiment illustrate that the proposed method can
inherit the advantages of both TSE and O-Space.
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4245. |
26 |
A Golden Angle of 68.75°
improves gradient spoiling in radial GRE
- permission withheld
Peter Speier1 and
Michael S. Hansen2
1Siemens AG Healthcare Sector, Erlangen,
Germany, 2National
Institutes of Health - NHLBI, MD, United States
Values for the Golden Angle depend on the symmetry of
the problem. For radial imaging with symmetric echoes a
value of 111.25° is typically used, but a value of
68.75°, corresponding to the adjacent angle, could be
used as well. For GRE sequences with radial trajectories
instead of Cartesian trajectories, the efficiency of
in-plane gradient spoilers is reduced due to the
non-constant spoiling direction; spoiling efficiency
decreases with increasing projection advance angle. We
conducted phantom measurements to demonstrate that
artifacts from incomplete spoiling can be reduced by
selecting the smaller Golden Angle value for the advance
angle.
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4246. |
27 |
Fast T1-Weighted Spin-Echo
Imaging with Fat Water Separation Using A Spiral Readout
Zhiqiang Li1, Dinghui Wang1,
Michael Schär1,2, Nicholas R Zwart1,
and James G Pipe1
1Neuroimaging Research, Barrow Neurological
Institute, Phoenix, AZ, United States, 2Philips
Healthcare, Cleveland, OH, United States
T1-weighted Cartesian SE imaging is sensitive to motion
and flow artifacts. Several alternatives have been
proposed including T1FLAIR PROPELLER and SE PROPELLER
but each may have its limitations. Fat signal in
T1-weighted brain imaging may be helpful or undesirable
depending on the applications. But water/fat separation
with current SE sequence results in long scan time. In
this work we propose a SE technique employing a spiral
readout with multiple TE shifts. The preliminary results
demonstrate its insensitivity to flow artifacts, the
capability for simultaneous water/fat separation, and
the flexibility in scan time reduction.
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4247. |
28 |
Generation of
proton-density- and T2-weighted images with and without
fluid suppression from a single radial turbo spin echo
acquisition
Martin Blaimer1, Daniel Neumann1,
Michael Völker1, Peter M. Jakob1,
and Felix A. Breuer1
1Research Center Magnetic-Resonance-Bavaria (MRB),
Würzburg, Bavaria, Germany
Radial turbo spin-echo sequences (RARE, TSE, FSE) allow
for an efficient acquisition of multi-contrast images.
By applying the k-space weighted image contrast (KWIC)
filter, images with the clinically important
proton-density (PD) and T2 contrast are obtained from a
single radial TSE acquisition. The purpose of this work
is to extend this method towards an efficient
suppression of the cerebrospinal fluid (CSF). This is
accomplished by Fourier-analysis of the multi-contrast
image series. In that way, CSF suppressed images with T2
contrast can be obtained in addition to the standard PD
and T2 weighted images from a single radial TSE
measurement.
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4248. |
29 |
Local Resolution Adaptation
for Curved Slice Echo Planar Imaging
Hans Weber1, Jakob Assländer1,
Sebastian Littin1, Jürgen Hennig1,
and Maxim Zaitsev1
1Department of Radiology, Medical Physics,
University Medical Center Freiburg, Freiburg, Germany
The ExLoc technique allows for excitation and
geometrically matched local encoding of curved slices
based on set of nonlinear magnetic encoding fields. For
robust sequences such as gradient echo, the variation in
image resolution resulting from the field nonlinearity
can be compensated by the local FOV technique. In this
study we explore the applicability of the local FOV
technique to ExLoc echo planar imaging. ExLoc echo
planar imaging is in particular promising for curved
slice functional imaging. However, the underlying
continuous trajectory is highly sensitive to B0
inhomogeneities.
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4249.
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30 |
Continuous Moving Bed MRI
with Golden Angle Radial Sampling
Saikat Sengupta1,2, David Smith1,2,
and E. Brian Welch1,2
1Radiology and Radiological Sciences,
Vanderbilt University, Nashville, TN, United States, 2Vanderbilt
University Institute of Imaging Science, Vanderbilt
University, Nashville, TN, United States
Continuous moving bed MRI (COMBI) is a high throughput
imaging technique for rapid whole body examination. In
this abstract, golden angle increment (111.25o azimuthal
step) based radial COMBI is introduced and compared to
previously reported linear angle COMBI. The benefit of
Golden angle sampling over a linear sampling scheme in
retrospective profile binning for arbitrary slice
thickness reconstruction is highlighted. We reconstruct
gradient echo images acquired with GA sampling with 8,
10 (undersampled) and 13.4 mm (fully sampled) slice
thickness and compare image quality with fully sampled,
13.4 mm linear angle radial reconstruction.
|
4250.
|
31 |
Free-breathing volumetric
abdominal MRI with a modified helical bSSFP-sequence
Melisa Okanovic1,2, Martin Blaimer2,
Felix Breuer2, and Peter Michael Jakob2,3
1Comprehensive Heart Failure Center,
University Hospital of Wuerzburg, Wuerzburg, Bavaria,
Germany, 2Magnetic
Resonance Bavaria (MRB), Wuerzburg, Bavaria, Germany, 3Department
of Experimental Physics 5, University of Wuerzburg,
Wuerzburg, Bavaria, Germany
In this work a helical bSSFP-sequence with a golden
angle acquisition for abdominal imaging is presented.
The technique allows continuously shifting the image
plane along the slice axis. By this a continuous 3D
volume is covered. Using sliding-window reconstruction
slices of arbitrary positions can be obtained. The
in-vivo applications on abdominal imaging during free
breathing are demonstrated.
|
4251. |
32 |
"Be nice to your
gradients!" Useful gradient modifications for SPI
Ali Caglar Özen1, Ute Ludwig1, and
Michael Bock1
1Radiology - Medical Physics, University
Medical Center Freiburg, Freiburg, Germany
Single Point Imaging (SPI) is a pure phase encoding
sequence and it requires long scan times and it has high
level gradients which are active during RF excitation.
In this work, a novel k-space ordering scheme is
proposed which results in less heating of gradient
coils. Additionally, the sequence is modified such as
the gradient levels are limited during RF excitation
which provides a smoother excitation profile while
preserving the low acoustic noise levels. The idea of
limiting gradient amplitudes during RF excitation can be
applied to other projection reconstruction sequences.
|
4252. |
33 |
PNS-Optimal Gradient
Waveform Design
Rolf F Schulte1 and
Ralph Noeske2
1GE Global Research, Munich, Germany, 2ASL
Europe, GE Healthcare, Berlin, Germany
Peripheral nerve stimulation (PNS) is often a more
limiting factor on modern MRI scanners than maximum
gradient strength and slewrate. Typically, the slewrate
is derated globally to adhere to PNS limitations. In
this work, the PNS limitation is already included in the
gradient waveform design in form of a time varying
slewrate, hence shortening the overall gradient
duration. The concept is demonstrated on exemplary
spiral and EPI gradient waveforms.
|
4253. |
34 |
Improving Single Shot
Acquisitions with Fast Rotary Nonlinear Spatial Encoding
Haifeng Wang1, Leo Tam1, R. Todd
Constable1, and Gigi Galiana1
1Department of Diagnostic Radiology, Yale
University, New Haven, CT, United States
Spatial encoding with nonlinear magnetic fields has been
studied recently, such as, O-Space imaging, Null Space
imaging, PatLoc, 4D-RIO, etc. Previous nonlinear
gradient encoding works have explored single shot
trajectories in nonlinear magnetic fields, where the
nonlinear gradients are just aiding the linear encoding.
In this abstract, a scheme of fast rotary nonlinear
spatial encoding, named as FRONSAC imaging, is proposed
to improve highly under-sampled data obtained with
linear gradients by adding nonlinear gradients with low
amplitudes and fast oscillations. The linear gradients
are applied on the three standard linear encoding fields
and the fast rotary gradients are applied on two
second-order encoding fields. Images are reconstructed
by Kaczmarz algorithm. The simulation results illustrate
the proposed scheme can greatly aid many highly
under-sampled linear trajectories, and improve image
quality in accelerated data acquisitions.
|
4254. |
35 |
Uniformity and symmetry
considerations in sampling designs for 3D radial MRI
Cheng Guan Koay1
1Department of Medical Physics, University of
Wisconsin-Madison, Madison, WI, United States
Uniformity in sampling measurements is a well known
guiding principle in acquisition design for 3D radial
MRI. Here, we argue that further improvement in image
quality can be achieved by taking antipodal symmetry (or
Hermitian symmetry) into account in the sampling design
process. Herein, we developed a technique capable of
generating very large, uniformly distributed points on
the unit sphere that are endowed with antipodal
symmetry. We observed a reduction of percent relative
errors with respect to the ground truth, which was
derived from a realistic numerical phantom, of about 10%
as compared to the commonly used scheme.
|
4255. |
36 |
Complementary Poisson-Disc
Sampling
Evan Levine1,2, Manojkumar Saranathan2,
and Brian Hargreaves2
1Electrical Engineering, Stanford University,
Palo Alto, CA, United States, 2Radiology,
Stanford University, Palo Alto, CA, United States
Many 3D dynamic MRI sequences use stochastic k-t
sampling trajectories with elliptical-centrically
sampled temporal phases. Poisson-disc k-space sampling
is commonly used to balance sampling incoherence for
compressed sensing (CS) and uniformity for g-factor in
parallel imaging. Other temporally-uniform stochastic
sampling patterns are used in approaches such as DISCO
and allow view-sharing, where temporal phases are
complementary and are used to reconstruct composite
images. To allow both view-sharing and CS reconstruction
of dynamic phases, we propose a method for generating
sampling patterns, each with complementary Poisson-disc
sample distributions.
|
4256. |
37 |
Proof of Concept for 3D
iCones: Single Petal, Rosette-like Sampling with a Tight TR
Constraint
Larry Hernandez1, Pablo Irarrazaval2,
Kevin M Johnson1, and Walter F Block1,3
1Medical Physics, University of
Wisconsin-Madison, Madison, WI, United States, 2Ingenieria
Electrica, Pontificia Universidad Catolica de Chile,
Santiago, Chile, 3Biomedical
Engineering, University of Wisconsin-Madison, Madison,
WI, United States
Out and back 3D radial trajectories have successfully
produced high resolution clinical imaging of the breast
and knee when tight TR constraints are present, such as
in bSSFP and/or fat/water separation methods where small
echo spacing is crucial. We investigate replacing the
bipolar gradients used in out and back trajectories with
a 3D, single petal, rosette-like trajectory to cover
k-space more efficiently while maintaining a tight TR
constraint. Termed iCones due to the similarity of the
trajectory to an ice cream cone, the number of
excitations necessary to cover an equivalent k-space
volume can be reduced by up to 1/3.
|
4257. |
38 |
A Real Asymmetric Fourier
Imaging (Real-AFI) with preserving phase polarity for
Inversion-prepared Spin-echo based-Sequence
Tokunori Kimura1, Mitsukazu Kamata1,
and Takashi Shigeta1
1MRI Systems Development Department, Toshiba
Medical Systems, Otawara, Tochigi, Japan
We proposed and assessed a new partial Fourier technique
named RealAFI where the phase polarity can be preserved
for inversion-prepared and Spin-Echo based imaging. 1D
simulation and 3T double IR (DIR) proton density
black-blood FSE (DIR-BB-FSE) with TI of shorter than
nulled blood Mz were assesed here. POCS method for
RealAFI was used modifying phase estimation; i.e., the
back-ground phase was calculated from circular low-pass
filtered data in k-space region that is smaller than the
actually sampled. RealAFI provided almost comprable
results as those from fully sampled data. RealAFI is
practically useful technique for inversion-prepared
spin-echo based imaging.
|
4258. |
39 |
Improving detection
specificity of iron oxide nanoparticles (IONPs) using the
SWIFT sequence with long T2 suppression
Luning Wang1, Wei Tang2, Zipeng
Zhen2, Hongming Chen2, Jin Xie2,
and Qun Zhao1
1Department of Physics and Astronomy,
University of Georgia, Athens, Georgia, United States, 2Department
of Chemistry, University of Georgia, Athens, Georgia,
United States
Iron oxide nanoparticles (IONPs) have been widely used
as a T2/T2* contrast agent in MRI. To avoid signal loss
caused by IONPs, pulse sequences, such as Ultrashort TE
(UTE) and Sweep Imaging with Fourier Transform (SWIFT),
can be implemented to acquire MR signals of IONPs, since
the echo times of these sequences are in a few
microseconds. But in the UTE and SWIFT images, long T2
tissues and fat may also appear bright, posing a
challenge to discriminate IONPs from surrounding
tissues. In this work, IONPs were used to target tumor
cells grafted in mice. In order to improve the detection
specificity of the IONPs delivered to tumors, we
hypothesized to embed saturation pulses into the SWIFT
sequence to suppress long T2 tissues and fat.
|
4259. |
40 |
Under-gapped SWIFT
Michael Tesch1, Steen Moeller1,
Ryan Chamberlain1, and Michael Garwood1
1CMRR, University of Minnesota, Minneapolis,
MN, United States
|
4260. |
41 |
Quiet short echo time
gradient echo MRI
Martin Ott1, Felix Breuer1, David
Grodzki2, Martin Blaimer1, Simon
Triphan1,3, and Peter Jakob1,4
1MRB Forschungszentrum für Magnet-Resonanz-Bayern
e.V., Würzburg, Bavaria, Germany, 2Siemens
AG, Erlangen, Bavaria, Germany, 3Diagnostic
and Interventional Radiology, University Hospital
Heidelberg, Heidelberg, Germany, 4Department
of Experimental Physics 5, University of Wuerzburg,
Würzburg, Germany
In this work, the acoustic-noise of gradient echo (GRE)
sequences is addressed. Thin slice thicknesses or short
echo times usually require fast switching gradients
which lead to high acoustic-noise levels. The focus is
on acoustic-noise reduction of the data acquisition for
images with these boundary conditions. Therefore, a
prototype sequence is implemented which makes use of
half pulse excitations as well as a novel k-space
sampling scheme. First in-vivo results are presented as
well as a significant reduction of acoustic-noise.
|
4261. |
42 |
Zero TE bone imaging
Florian Wiesinger1, Laura Sacolick2,
Sandeep Kaushik3, Sangtae Ahn4,
Gaspar Delso5, and Dattesh Shanbhag3
1GE Global Research, Munich, Germany, 2GE
Healthcare, Munich, Germany, 3GE
Global Research, Bangalore, India, 4GE
Global Research, Niskayuna, NY, United States, 5GE
Healthcare, Zurich, Switzerland
In this abstract we investigate the feasibility of zero
TE imaging for depiction of cortical bone structures in
the head and pelvis. Proton density contrast in
combination with logarithmic inverse scaling is used to
highlight bone structures and differentiate them from
soft tissues and background air. Different from prior
art, no long T2 suppression methods (like echo
subtraction or saturation prepulses) are required,
rendering this method fast, robust and effective.
In-vivo volunteer experiments indicate excellent 3D
cortical bone depiction as required for instance for
PET/MR attenuation correction and MR-based radiation
therapy planning.
|
4262. |
43 |
ZTE Imaging with T1
Contrast
Markus Weiger1, David Otto Brunner1,
Michael Wyss1, Benjamin Emanuel Dietrich1,
Bertram Jakob Wilm1, and Klaas Paul
Pruessmann1
1Institute for Biomedical Engineering,
University and ETH Zurich, Zurich, Switzerland
Zero echo time (ZTE) imaging enables efficient direct
MRI of tissues with very rapid transverse relaxation. In
addition, this intrinsically three-dimensional technique
is also very fast, has high robustness against eddy
current and off-resonance effects, and the acoustic
noise of the sequence is close to ambient level. All
these beneficial properties make ZTE imaging also
attractive beyond short-T2 applications. However, due to
zero TE and usually small flip angles, intrinsic
contrast mechanisms are somewhat limited. Therefore, in
the present work, magnetisation preparation is used to
create T1 contrast in ZTE images.
|
4263. |
44 |
Selective Imaging of Bound
Water in Cortical Bone with Inversion Recovery Prepared
Ultrashort Echo Time Sequences
Jiang Du1, Shihong Li1, Eric Chang1,
Christine B Chung1, and Graeme Bydder1
1Radiology, University of California, San
Diego, San Diego, CA, United States
Bone water occurs at various locations and in different
binding states. In normal bone the majority of bone
water is loosely bound to the organic matrix. There is
also a significant amount of free water residing in the
pores of bone which is responsible for nutrient
diffusion and contributes to the viscoelastic properties
of cortical bone. Separation of bound water from free
water is of critical importance since the two make
different contributions to the mechanical properties of
bone. In this study we aimed to investigate the effects
of inversion time (TI) on bone free water signal using
an adiabatic inversion recovery prepared ultrashort echo
time (IR-UTE) sequence on a clinical whole body 3T
scanner.
|
4264. |
45 |
ZTE MRI enables imaging of
Egyptian Mummy: A comparison to CT and THz imaging
Ute Ariane Ludwig1, Jan-Bernd Hövener1,2,
Ali Özen1, Lena Öhrström3, Andreas
Bitzer4, Markus Walther4, Dominik
Elverfeldt1, Frank Rühli3, and
Michael Bock1
1Radiology - Medical Physics, University
Medical Center Freiburg, Freiburg, Germany, 2German
Consortium for Cancer Research (DKTK), German Cancer
Research Center (DKFZ), Heidelberg, Germany, 3Centre
for Evolutionary Medicine, Institute of Anatomy,
University of Zürich, Zürich, Switzerland, 4Molecular
and Optical Physics, University of Freiburg, Freiburg,
Germany
Imaging of dehydrated objects is usually performed with
CT due to the low water content. With the development of
MR sequences with short or even zero echo times, MR is
also able to detect tissues with fast decaying signal
like bones or teeth. In this work the potential of the
ZTE technique has been evaluated on an ancient Egyptian
mummified fish and compared to other imaging modalities
like CT and Terahertz imaging.
|
4265. |
46 |
Center-Acquisition-at-Partial-Ramp Imaging (CAPRI) compared
to Ultra-Short Echo-Time (UTE) Imaging for Diagnosis of
Dental Demineralization
Anna-Katinka Bracher1, Erich Hell2,
Johannes Ulrici2, and Volker Rasche1
1Internal Medicine II, University Hospital of
Ulm, Ulm, BW, Germany, 2Sirona
Dental Systems, Bensheim, HE, Germany
Ultra short echo time (UTE) imaging has proven its
potential for radiation free detection of caries lesions
and also for classification of lesion progression using
ultra short T2* mapping. The UTE imaging sequence is
very sensitive to gradient delay related k-space center
shifts and off-resonance effects. C APRI allows
automatic correction of gradient delays, reduces
off-resonance and T2 induced blurring artefacts and
provides T2* mapping for lesion classification.
|
4266. |
47 |
First promising results
using Ultra-short Echo time MR imaging for bone tumor
diagnosis
Karl-Heinz Herrmann1, Martin Krämer1,
Martin Stenzel2, Hans-Joachim Mentzel2,
and Jürgen R Reichenbach1
1Medical Physics Group, Institute of
Diagnostic and Interventional Radiology I, Jena
University Hospital - Friedrich Schiller University
Jena, Jena, Germany, 2Pediatric
Radiology, Institute of Diagnostic and Interventional
Radiology I, Jena University Hospital - Friedrich
Schiller University Jena, Jena, Germany
High resolution (0.55m isotropic) 3D radial center-out
ultra-short echo time (UTE) MRI with interspersed fat
saturation pulses is acquired for a case of a skull bone
tumor and compared to CT images. In the presented case
the tumor has not yet infiltrated into the soft tissue
and the thin separating layer of bone can clearly be
identified on both modalities. UTE images additionally
show the integrity of the meninges, which are a short T2
species not visible at regular echo times or in CT. This
suggests that UTE MRI might be a valuable additional
modality in bone tumor diagnosis.
|
4267. |
48 |
Scantime optimized 3D
radial Ultra-short Echo Time imaging for breathhold
examinations
Karl-Heinz Herrmann1, Martin Krämer1,
and Jürgen R. Reichenbach1
1Medical Physics Group, Institute of
Diagnostic and Interventional Radiology I, Jena
University Hospital - Friedrich Schiller University
Jena, Jena, Germany
For spoiled gradient echo 3D radial center out UTE
sequences standard, predictable RF and gradient spoiling
can only be achieved by constant gradient moments every
TR, which requires center-out-in trajectories to remove
the direction dependency. The center-in trajectory
provides acquisition of a second echo, but for many
application the second echo is not required. Naively
using center-out trajectories combined with RF spoiling
and constant spoiler gradients in fixed direction can
lead to stripe artifacts. By extending the duration of
the rotated readouts by a variable, direction dependent
the spoiling is optimized while the TR is simultaneously
minimized for fast radial acquisition.
|
|
|
|
ELECTRONIC
POSTER SESSION ○ PULSE SEQUENCES & RECONSTRUCTION |
Quantitative Techniques
Wednesday 14 May 2014
Exhibition Hall |
10:00 - 11:00 |
|
|
|
Computer # |
|
4268. |
49 |
A Graph Cut Approach to
Regularized Harmonic Estimation for Steady-State MR
Elastography
Joshua D. Trzasko1, Daniel C. Mellema1,
Armando Manduca1, Scott A. Kruse1,
Adil E. Bharucha1, Kiaran P. McGee1,
and Philip A. Araoz1
1Mayo Clinic, Rochester, MN, United States
In steady-state magnetic resonance elastography (MRE),
quantitative tissue stiffness maps are constructed using
the first temporal harmonic of a phase contrast image
series. The accuracy of a stiffness map intrinsically
depends on the estimated harmonic from which it is
derived. Recently, a robust statistical framework for
harmonic estimation was proposed, but the associated
optimization strategy for performing the estimation was
limited to phase-wrap free data. In this work, we
describe a novel complex graph cut optimization strategy
for harmonic estimation that can operate effectively in
the presence of wrapping, and discuss several unique
computational challenges associated with this problem.
|
4269. |
50 |
Comparison of MR
elastography inversion methods on high-resolution
measurements in the human brain
Ruth J. Okamoto1, Curtis L. Johnson2,
Matthew D. McGarry3, Andrew A. Badachhape4,
Bradley P. Sutton2, John G. Georgiadis2,
and Philip V. Bayly1
1Mechanical Engineering and Materials
Science, Washington University, Saint Louis, Missouri,
United States, 2Beckman
Institute for Advanced Science and Technology,
University of Illinois, Urbana-Champaign, Illinois,
United States, 3Dartmouth
College, Hanover, New Hampshire, United States,4Biomedical
Engineering, Washington University, Saint Louis,
Missouri, United States
Three approaches, local frequency estimation (LFE),
local direct inversion (LDI), and nonlinear inversion (NLI),
were used to estimate viscoelastic parameters of the
human brain from high-resolution magnetic resonance
elastography (MRE) measurements. While each inversion
method has been independently validated using gel
phantoms, the complicated structure of the human head
(comprising skull, meninges, CSF, and brain) and the
complex material behavior of the brain (anisotropic,
heterogeneous, and poroelastic) challenge the underlying
assumptions of each method. Differences were found
between average shear modulus estimates obtained by the
three methods (NLI>LFE>LDI), however the relative
differences between individuals were consistent among
all methods.
|
4270. |
51 |
Modes of Shear Waves in
Brain MR Elastography
Cemre Ariyurek1,2, Yusuf Ziya Ider1,
Necip Gurler1, Safa Ozdemir1, Alp
Emek1, Arif Sanli Ergun3, and
Ergin Atalar1,2
1Department of Electrical and Electronics
Engineering, Bilkent University, Ankara, Turkey, 2National
Magnetic Resonance Research Center (UMRAM), Ankara,
Turkey, 3Department
of Electrical and Electronics Engineering, TOBB-University
of Economics and Technology, Ankara, Turkey
In this study, modes of shear waves that may form during
MR elastography of brain are investigated. Results of
eigenfrequency simulations indicate that there are
eigenmodes that may be excited by actuators at correct
frequencies. In the results of frequency domain
simulations and human experiments peak displacement(s)
are observed at certain frequencies, having similar
shear wave patterns to eigenmodes. A shift in the
frequency of the peak displacement is observed in
simulations when stiffness value of brain is altered.
Thus, this method can be used for diagnosing diseases
altering stiffness by detecting a frequency shift in
peak displacement.
|
4271. |
52 |
Application of SLIM-MRE on
an In-Vivo Murine Model
Allen Q. Ye1, Temel K. Yasar2,
Altaf Khan2, Ziying Yin1, Dieter
Klatt1, Thomas J. Royston1, and
Richard L. Magin1
1Department of Bioengineering, University of
Illinois at Chicago, Chicago, IL, United States, 2Department
of Mechanical Engineering, University of Illinois at
Chicago, Chicago, IL, United States
In this study we have utilized SampLing Interval
Modulation (SLIM)-MRE on an in-vivo murine experiment.
SLIM-MRE enables acquisition of displacement information
in multiple directions without increasing total
acquisition time. This enables us to acquire MRE images
in one-third of the time compared to conventional MRE,
which reduces the health problems that might arise due
to prolonged anesthesia on mice and also reduces the
image misregistration artifacts that might originate
from motion of the internal organs such as the bladder
and intestines throughout time.
|
4272. |
53 |
Brown Adipose Tissue with
Low Fat Content in Newborns with Hypothermia
Houchun Harry Hu1, Tai-Wei Wu2,
Larry Yin3, Mimi S. Kim3, Jonathan
M. Chia4, Thomas G. Perkins4, and
Vicente Gilsanz1
1Radiology, Children's Hospital Los Angeles,
Los Angeles, California, United States, 2Neonatology,
Children's Hospital Los Angeles, Los Angeles,
California, United States, 3Pediatrics,
Children's Hospital Los Angeles, Los Angeles,
California, United States, 4Philips
Healthcare, Cleveland, Ohio, United States
We report the observation of brown adipose tissue with
low fat content in newborns with hypoxic-ischemic
encephalopathy (HIE) after hypothermia therapy treatment
in the neonatal intensive care unit. Ten HIE newborns
were studied at 3T using a six-echo
chemical-shift-encoded water-fat sequence. Fat-signal
fraction (FF) measurements of the supraclavicular brown
adipose tissue depot were compared to values from five
non-HIE newborns. The average FF range was 10.3-29.9%
and 23.7-42.2% for the HIE and non-HIE group,
respectively (p<0.01). We speculate that hypothermia
therapy in HIE neonates promotes BAT-mediated
non-shivering thermogenesis, which subsequently leads to
a depletion of the tissue’s intracellular fat stores.
|
4273. |
54 |
View-sharing and Compressed
Sensing in Two-Point Dixon-based DCE-MRI
Evan Levine1,2, Brady Quist1,2,
Bruce Daniel2, Brian Hargreaves2,
and Manojkumar Saranathan2
1Electrical Engineering, Stanford University,
Palo Alto, CA, United States, 2Radiology,
Stanford University, Palo Alto, CA, United States
High spatiotemporal resolution multiphasic DCE-MRI
entails tradeoffs of spatial and temporal resolution. To
address the tradeoff, view-sharing schemes have been
proposed, some of which use stochastic k-space
trajectories. Compressed sensing offers a way to reduce
view-sharing and temporal footprint. We propose a novel
method of integrating view-sharing, compressed sensing,
parallel imaging, and two-point Dixon based fat water
separation that allows new tradeoffs in spatial and
temporal resolution. A combination of CS, parallel
imaging, and partial view-sharing is a suitable
alternative to conventional view-sharing, especially
when restricted to the water image using a two-point
Dixon model.
|
4274. |
55 |
Accelerated in vivo mapping
of T2 relaxation
from radially undersampled datasets using compressed sensing
and model-based reconstruction
Noam Ben-Eliezer1, Li Feng1, Kai
Tobias Block1, Daniel K. Sodickson1,
and Ricardo Otazo1
1Department of Radiology, New York University
School of Medicine, Bernard and Irene Schwartz Center
for Biomedical Imaging, New York, NY, United States
Accurate in vivo estimation of T2 relaxation
values with high spatial resolution is very challenging
in clinical settings. This work, presents the fusion of
a recently-developed T2 mapping
technique – the echo-modulation curve (EMC)
algorithm – with compressed sensing and model-based
reconstruction using undersampled radial trajectories.
The EMC approach avoids the common challenges associated
with stimulated echoes in multi spin-echo protocols,
while compressed sensing removes undersampling-related
aliasing artifacts. The synergistic combination of the
scanner-invariant EMC algorithm with a folding-free
radial sampling scheme offers accelerated quantification
of functional (T2) and morphological
(proton-density) information at sub-millimeter spatial
resolutions and with reduced sensitivity to motion.
|
4275. |
56 |
Accelerated T2 Prime
Mapping using Dynamic Compressed Sensing with Patch-based
Low-Rank Penalty
Dongwook Lee1, Eung Yeop Kim2,
Huisu Yoon1, Sunghong Park1, and
Jong Chul Ye1
1Korea Advanced Institute of Science and
Technology, Daejeon, Korea, 2Gachon
University Gil Medical Center, Incheon, Korea
A compressed sensing algorithm is applied to T2 prime
mapping which is useful for diagnosis of cerebrovascular
disorders such as occlusive carotid disease and ischemic
stroke. The quantitative measure of parameter maps with
high resolution requires the acquisition of multiple
images. That is usually associated with long acquisition
times. To reduce the acquisition time of MR data, we use
a compressed sensing algorithm using patch based low
rank penalty for the reconstruction of T2 and T2-star
weighted images to obtain the T2 prime map.
|
4276. |
57 |
On the need for T2*
correction in quantitative water-fat imaging of skeletal
muscle
Dimitrios C Karampinos1, Stefan Ruschke1,
Holger Eggers2, Marcus Settles1,
Hendrik Kooijman3, Peter Börnert2,
Ernst J Rummeny1, and Thomas Baum1
1Department of Diagnostic and Interventional
Radiology, Technische Universität München, Munich,
Germany, 2Philips
Research Laboratory, Hamburg, Germany, 3Philips
Healthcare, Hamburg, Germany
It is known that T2* decay effects can induce
significant bias in the estimation of the fat fraction
using a chemical shift based water-fat separation
methods, especially in the presence of short T2*.
However, the need for T2* correction has not
been previously characterized in skeletal muscle fat
quantification, where T2* decay is moderate
but susceptibility-induced fat resonance shift effects
are also present. The present study shows the existence
of a synergistic effect between T2* decay and
susceptibility shift on the estimation of the fat
fraction. Single T2* correction reduces fat
fraction bias due to the synergistic effect of T2*
decay and susceptibility shift, independent of the
choice of TEs.
|
4277. |
58 |
Estimating T1 from
Multichannel Variable Flip Angle SPGR Sequences with Graph
Cuts
Daniel C Mellema1, Joshua D Trzasko1,
and Armando Manduca1
1Mayo Clinic, Rochester, Minnesota, United
States
Quantitative measurements of T1 values have been used to
monitor pathology. Recently a maximum likelihood
estimator was created to obtain the best estimate of T1
values in the presence of noise, with no a priori
assumption about image structure, for a variable flip
angle spoiled gradient-recalled echo sequence. While
this improved estimations, individual voxel estimates
exhibited high variance. It is hypothesized that adding
a spatial prior promoting piecewise smoothness will
improve estimations. Since standard continuous
optimization techniques are inefficient and unstable for
this generalized nonlinear least squares problem, an
iterative graph cut strategy was developed for the
regularized T1-estimation.
|
4278. |
59 |
MP2RAGE in mice
- permission withheld
Nathalie Just1, Olivier Reynaud2,
and Rolf Gruetter1,3
1CIBM-AIT, EPFL, Lausanne, Switzerland, 2Laboratory
for functional and metabolic Imaging, EPFL, Lausanne,
Switzerland, 3Departments
of Radiology, University of Lausanne and University of
Geneva, Lausanne and Geneva, Switzerland
With the growing number of transgenic animal models of
diseases, it is of paramount importance to develop high
spatial resolution T1-weighted imaging techniques for
structural imaging at ultra high fields. In the present
work, the MP2RAGE technique was implemented at 14.1T and
used to acquire T1-weighted images of a MnCl2-doped
phantom and knockout mice. T1 mapping was also
performed. The high translational value of MP2RAGE
sequences was demonstrated.
|
4279. |
60 |
Multi-Echo SE- vs. Multi
GRE-Derived Myelin Water Fraction Imaging at 3 T
Eva Alonso Ortiz1 and
Gilbert Bruce Pike2
1Department of Physics, Medical Physics Unit,
McGill University, Montreal, QC, Canada, 2Department
of Radiology and Hotchkiss Brain Institute, University
of Calgary, Calgary, Alberta, Canada
|
4280.
|
61 |
Three Dimensional
Quantitative Myelin Water Imaging using Direct Visualization
of Short Transverse Relaxation Time Component (ViSTa)
Se-Hong Oh1,2, Sung Suk Oh2, Joon
Yul Choi2, Jang-Yeon Park3, and
Jongho Lee2
1Imaging Institute, Cleveland Clinic,
Cleveland, Ohio, United States, 2Department
of Radiology, Perelman School of Medicine, University of
Pennsylvania, Philadelphia, Pennsylvania, United States, 3School
of Biomedical Engineering, College of Biomedical and
Health Science, Konkuk University, Chungju, Korea
In this study, a new 3D myelin water imaging sequence
that covers the entire brain (FOV = 240 ¡¿ 240 ¡¿ 128
mm^3; resolution = 1.5 ¡¿ 1.5 ¡¿ 4 mm^3) in less than 8
minutes was developed. This method is based on a
recently proposed novel approach to MWI, called Direct
Visualization of Short Transverse Relaxation Time
Component (ViSTa). It provides a high quality myelin
water fraction map.
|
4281. |
62 |
Reproducibility of
DESPOT1&2 at 3.0T
Anna Combes1, Tobias C Wood1,
Gareth J Barker1, and Steven C R Williams1
1Neuroimaging, King's College London,
Institute of Psychiatry, London, England, United Kingdom
We present the results of a reproducibility study of
quantitative T1 and T2 mapping using DESPOT at 3.0T.
|
4282. |
63 |
Fast variable
inversion-recovery time EPI for anatomical reference and
quantitative T1 mapping
Ville Renvall1,2, Thomas Witzel1,2,
Lawrence L. Wald1,2, and Jonathan R. Polimeni1,2
1Athinoula A. Martinos Center for Biomedical
Imaging, Massachusetts General Hospital, Charlestown,
MA, United States, 2Department
of Radiology, Harvard Medical School, Boston, MA, United
States
Fast T1 mapping
method using permuted slice acquisition order and TI
skipping on an IR EPI scan was developed. The resulting
T1 and
T2*/ spin density images were
used to synthesize inversion recovery EPI data with an
arbitrary, selectable TI. Automatic brain segmentation
and cortical surface reconstruction of the synthesized
data using FreeSurfer were successful and could serve as
basis for distortion matched anatomical reference for
functional MRI.
|
4283. |
64 |
Iterative Compressed
Sensing Reconstruction Using Forward Model Based on MR
Multi-Parameter
Jinseong Jang1, Tae-Joon Eo1,
Narae Choi1, Minoh Kim1, Dongyeob
Han1, Dong-Hyun Kim1, and Dosik
Hwang1
1School of Electrical and Electronic
Engineering, Yonsei University, Seoul, Korea
Magnetic resonance fingerprinting is a method that can
quantitatively estimate MR parameters such as T1, T2 of
specific tissues, by matching pattern of signal
evolution obtained from the scanner with the pattern of
signal evolution that is generated from MR forward
modelling. the well-accepted Cartesian trajectory needs
to be considered for robust implementation of MRF for
fast processing In this study, efficient iterative
compressed sensing (CS) reconstruction method is
proposed to highly accelerate the Cartesian-trajectory
based acquisition for MRF, leading to the reduction
factor up to 16.
|
4284. |
65 |
Sparse Parametric Imaging
for direct parameter measurement: theory and phantom
experiments
Ross A Little1, Geoff J M Parker1,
and Chris Rose1
1Centre for Imaging Sciences, University of
Manchester, Manchester, United Kingdom
We present a novel method for directly measuring
morphological parameters from highly undersampled data
without need for image reconstruction. We introduce the
theory underpinning the approach and demonstrate it
using synthetic and physical phantoms. The physical
phantom measurements showed excellent agreement with
ground truth (R2>0.999). The mean measurement
bias was less than one voxel. We conclude that SPI is a
method with the potential to allow quantitative
measurements of interest to be made from highly
undersampled k-space data without need for explicit
image reconstruction.
|
4285. |
66 |
15T Ultrahigh Field Fast MR
Fingerprinting with Optimized Trajectories
Ouri Cohen1, Brandon D. Armstrong1,2,
Mathieu Sarracanie1,2, Christian T. Farrar1,
Jerome L. Ackerman1, and Matthew S. Rosen1,2
1Department of Radiology, MGH/Athinoula A.
Martinos Center for Biomedical Imaging, Massachussets
General Hospital, Charlestown, MA, United States,2Department
of Physics, Harvard University, Cambridge, MA, United
States
We demonstrate an application of Magnetic Resonance
fingerprinting at 15T optimized to utilize only 10
measurements to obtain T1,T2,PD,B0 and B1 maps in an in
vivo healthy mouse brain.
|
4286. |
67 |
Effective data sharing
method for extreme cartesian undersampling in MRF
Tae-joon Eo1, Jinseong Jang1,
Minoh Kim1, Narae Choi1, Dongyeob
Han1, Dong-hyun Kim1, and Dosik
Hwang1
1School of Electrical and Electronic
Engineering, Yonsei University, Seoul, Korea
This study demonstrates that the accurate parameter maps
can be obtained from extremely undersampled Cartesian
trajectory data in MRF by applying the proposed data
sharing method.
|
4287. |
68 |
Singular Value
Decomposition for Magnetic Resonance Fingerprinting in the
Time Domain
Debra F. McGivney1, Dan Ma2, Haris
Saybasili3, Yun Jiang2, and Mark
A. Griswold1,2
1Radiology, Case Western Reserve University,
Cleveland, Ohio, United States, 2Biomedical
Engineering, Case Western Reserve University, Cleveland,
Ohio, United States, 3Siemens
Healthcare, Chicago, Illinois, United States
Magnetic resonance fingerprinting is a technique that
can provide quantitative maps of tissue parameters (T1,
T2, and off-resonance) through matching observed signals
to a precomputed dictionary of modeled signal
evolutions. To retrieve the parameters, the inner
product between the signal and each dictionary entry is
computed to find the entry corresponding to the maximum.
We propose to compress the size of the dictionary and
observed signals in the time domain by applying the
singular value decomposition (SVD), thereby reducing the
number of computations required while retaining the most
relevant information from the dictionary.
|
4288. |
69 |
Simultaneous Quantification
of T1, T2, Fat Fraction and Off Resonance Frequency Using
Phase Sweep SSFP
Sarah Thiesson1 and
Richard B Thompson1
1Biomedical Engineering, University of
Alberta, Edmonton, Alberta, Canada
A new approach for simultaneous quantification of water
T1 and T2, fat fraction (FF) and off-resonance frequency
is proposed using a saturation-recovery prepared phase
sweep SSFP method. The signal intensity profile in each
pixel, as a function of RF phase increment (conventional
SSPF has a constant 180° increment), is fit as a
weighted sum of simulated fat and water basis sets
(Bloch equations) to derive T1, T2, FF and
off-resonance. This method was validated with Monte
Carlo simulations (to characterize accuracy and
precession), T1/T2 and fat phantoms, and in-vivo with
characterization of tibialis, gastroc and soleus
skeletal muscle groups
|
4289. |
70 |
High Speed MR
Fingerprinting at 6.5 mT
Mathieu Sarracanie1,2, Brandon D. Armstrong1,2,
and Matthew S. Rosen1,2
1Department of Radiology, MGH/Athinoula A.
Martinos Center for Biomedical Imaging, Charlestown, MA,
United States, 2Department
of Physics, Harvard University, Cambridge, MA, United
States
We have demonstrated MR Fingerprinting at low magnetic
field, which results in simultaneous measurement of 4
quantitative parameters, and thus provides 4 different
image contrasts in a single acquisition (proton density,
T1, T2 and
off-resonance) in less than 15 minutes. This technique
is of particular relevance at low magnetic field where
SNR and contrast are tied to long acquisition times. The
combination of MRF with low field MRI scanners has great
potential to revolutionize future transportable MRI
systems.
|
4290. |
71 |
MR Fingerprinting Using
FISP
Yun Jiang1, Dan Ma1, Nicole
Seiberlich1, Vikas Gulani2, and
Mark A. Griswold1,2
1Department of Biomedical Enginneering, Case
Western Reserve University, Cleveland, OH, United
States, 2Department
of Radiology, Case Western Reserve University,
Cleveland, OH, United States
Synopsis: MR Fingerprinting (MRF) has been shown to be
extremely efficient in generating multiple parametric
maps. Here we explore MRF using a FISP-based sequence
with a spiral trajectory to generate T1, T2,
and M0 maps
simultaneously. The result shows that high quality
quantitative relaxation parameters can be estimated
using the proposed method. With the introduction of the
additional unbalanced gradients, the sequence is
insensitive to inhomogeneities in the main magnetic
field. This method has its potential to expand the areas
of application of MRF, and extend the quantification to
other MR parameters.
|
4291. |
72 |
Motion Sensitivity in MR
Fingerprinting
Eric Z.C Wu1, Maxwell L Wong2, and
Eric C Wong3
1University of Southern California, Los
Angeles, California, United States, 2UCSD,
San Diego, California, United States, 3Department
of Radiology and Psychiatry, UCSD, San Diego,
California, United States
In this study, we simulate the effects of motion in MR
Fingerprinting. We established that motion related
artifacts are sensitive to the time at which motion
occurs in the scan, and that T1 maps are more sensitive
to the position of the subject near the beginning of the
scan, likely due to T1 sensitivity from the initial
inversion pulse.
|
|
|
|
ELECTRONIC
POSTER SESSION ○ PULSE SEQUENCES & RECONSTRUCTION |
Image Processing & Analysis
Wednesday 14 May 2014
Exhibition Hall |
10:00 - 11:00 |
|
|
|
Computer # |
|
4292. |
73 |
Dual Registration of
Abdominal Motion in free-breathing data sets acquired using
dynamic MRI
Alex Menys1, Valentin Hamy1,
Caroline Hoad2, Jesica Makanyanga1,
Freddy Odille3, Penny Gowland2,
Stuart A Taylor1, and David Atkinson1
1UCL, London, United Kingdom, 2Sir
Peter Mansfield MRI Centre, University of Nottingham,
Nottingham, United Kingdom, 3INSERM,
Nancy, France
At present, registration-based quantification of bowel
motility from dynamic MR is limited to breath-hold
studies. Here we validate a dual-registration technique
robust to respiratory motion for the assessment of small
bowel and colonic motility.
|
4293. |
74 |
Quantitative evaluation
measures for assessment of motion registration efficacy in
dynamic contrast imaging
Dattesh D Shanbhag1, Venkata V Chebrolu1,
Sandeep N Gupta2, Patrice Hervo3,
and Rakesh Mullick4
1Medical Image Analysis Laboratory, GE Global
Research, Bangalore, Karnataka, India, 2Clinical
Systems and Signal Processing, GE Global Research,
Niskayuna, NY, United States, 3GE
Healthcare, Buc, France, 4Diagnostics
and Biomedical Technologies, GE Global Research,
Bangalore, Karnataka, India
Local correlation and dispersion based measures have
been introduced to reliably reflect the improvement in
dynamic 4D MRI data tissue alignment post motion
correction. These measures can be used as part of motion
correction workflow and provide means for quantifying
the efficacy of motion correction schemes in dynamic
data across different anatomies and clinical sites.
|
4294. |
75 |
Comparison between discrete
and continuous propagator indices from Cartesian q-space DSI
sampling
Mauro Zucchelli1, Eleftherios Garyfallidis2,
Michael Paquette2, Sylvain Merlet3,
Gloria Menegaz1, and Maxime Descoteaux2
1Department of Computer Science, University
of Verona, Verona, Italy, 2Sherbrooke
Connectivity Imaging Lab (SCIL), Université de
Sherbrooke, Sherbrooke, Quebec, Canada, 3INRIA
Sophia Antipolis-Méditerranée, Sophia Antipolis, France
DSI was one of the first techniques used to infer
complex fiber configurations. However, DSI discrete
propagator representation suffers from a limited
frequency band, which makes infinite integration
impossible. This abstract aims at comparing DSI
propagator derived indices with those obtained on a
continuous analytical model like SHORE. The models were
tested both on simulated and human data on a Cartesian
grid sampling scheme. The indices used for the
comparison were the orientation distribution function,
the return to the origin probability and the mean square
displacement. Results indicate that the 3D-SHORE
provides an improved estimation of the signal
properties.
|
4295.
|
76 |
Highly-Accelerated
Real-time T2-weighted Imaging with Radial GRAPPA
and Low-latency GPU Reconstruction
Di Xu1, Haris Saybasili2,
Aravindan Kolandaivelu3, Henry Halperin1,3,
Menekhem M. Zviman3, Mark A. Griswold4,5,
Nicole Seiberlich5, and Daniel A. Herzka1
1Department of Biomedical Engineering, Johns
Hopkins School of Medicine, Baltimore, MD, United
States, 2Siemens
Healthcare USA, Inc., Chicago, IL, United States, 3Department
of Medicine, Division of Cardiology, Johns Hopkins
School of Medicine, Baltimore, MD, United States, 4Department
of Radiology, Case Western Reserve University,
Cleveland, OH, United States, 5Department
of Biomedical Engineering, Case Western Reserve
University, Cleveland, OH, United States
T2-weighted (T2W) images have
widespread application in MRI and are particularly
valued in interventional MRI. However, most existing T2W
imaging techniques are not applicable to interventional
imaging and are much slower than other competing imaging
modalities used in interventional guidance. We present T2-weighted
radial interrupted balanced SSFP (T2W-riSSFP),
a technique allows high speed real-time imaging as well
as edema visualization with significant T2 contrast.
This technique was evaluated on phantoms, normal human
subjects, and animal model with acute myocardial
infarction and edema. T2W-riSSFP can be
applied to real-time interventional guidance where
heavily T2-weighted images are needed.
|
4296. |
77 |
Interactive Visualization
of 4D Coronary MRI with Prolonged Acquisition Window: GPU-Accelerated
Flexible Gridding Reconstruction for Lag-Free Performance
Keigo Kawaji1, Sebastien Roujol1,
Warren J Manning1,2, and Reza Nezafat1
1Medicine, Beth Israel Deaconess Medical
Center and Harvard Medical School, Boston, MA, United
States, 2Radiology,
Beth Israel Deaconess Medical Center and Harvard Medical
School, Boston, MA, United States
A novel coronary imaging method that allows cardiac
motion assessment within the acquisition window of the
k-space segmented volume has recently been proposed
using 3D stack-of-stars (SOS) with golden-angle-derived
interleaving for encoding temporal information within
different segments of the acquisition window. However,
non-Cartesian radial reconstructions are typically
unsuitable for immediate visualization due to the
computationally expensive gridding operation. This step
may bottleneck the visualization and disturb the
workflow for interactive clinical assessment. We have
developed an accelerated reconstruction workflow that
uses a graphic processing unit (GPU) for rapid gridding
of the acquired radial data, and examine its
implementation and performance.
|
4297. |
78 |
gpuNUFFT - An open source
GPU library for 3D regridding with direct Matlab interface
Florian Knoll1, Andreas Schwarzl2,
Clemens Diwoky2, and Daniel K Sodickson1
1Bernard & Irene Schwartz Center for
Biomedical Imaging, Department of Radiology, NYU School
of Medicine, New York, New York, United States,2Institute
of Medical Engineering, Graz University of Technology,
Graz, Styria, Austria
Image reconstruction for 3d non-Cartesian trajectories
is still challenging due to expensive computation times.
Parallel implementations using GPUs have evolved as a
computationally effective way to tackle this problem.
Current software packages are often restricted 2d
imaging and are usually integrated in larger
reconstruction frameworks. This makes re-use challenging
especially when considering that the large majority of
code for image reconstruction is written in Matlab. This
work introduces gpuNUFFT, a new open-source 3d
regridding GPU implementation with a built in Matlab
interface that is straightforward to include in all
implementations of iterative image reconstruction.
|
4298. |
79 |
The ISMRM Raw Data Format
Souheil J Inati1, Peter Kellman2,
Joseph Naegele1, Sonia Nielles-Vallespin2,
Vinai Roopchansingh1, Thomas S Sorensen3,
Kaveh Vahedipour4, Hui Xue2,
Nicholas R Zwart5, and Michael S Hansen2
1National Institute of Mental Health,
National Institutes of Health, Bethesda, MD, United
States, 2National
Heart Lung and Blood Institute, National Institutes of
Health, Bethesda, MD, United States, 3Department
of Computer Science, Aarhus University, Aarhus, Denmark, 4Institute
of Neurosciences and Medicine, Forschungszentrum
Juelich, Juelich, Germany, 5Barrow
Neurological Institute, Phoenix, AZ, United States
A common raw data format is a prerequisite for sharing
MR image reconstruction algorithms and code, and is a
necessary component of reproducible research. Ideally,
this common format would be vendor neutral, and would
capture the data fields needed to describe the details
of the MR experiment so as to permit image
reconstruction from the raw data. We propose the ISMRM
Raw Data (ISMRMRD) format, which is described by an XML
schema and several C-style structs. We demonstrate an
implementation using HDF5 files for storage, along with
C++, Python, MATLAB, and JAVA libraries for reading and
writing ISMRMRD files.
|
4299. |
80 |
Universal shape
interpolation using the Radon transform
Peter Adany1, Phil Lee2, Douglas
R. Denney3, Sharon G. Lynch4, and
In-Young Choi4
1Hoglund Brain Imaging Center, University of
Kansas Medical Center, Kansas City, KS, United States, 2Department
of Molecular and Integrative Physiology, University of
Kansas Medical Center, Kansas City, KS, United States, 3Department
of Clinical Psychology, University of Kansas, Lawrence,
KS, United States, 4Department
of Neurology, University of Kansas Medical Center,
Kansas City, KS, United States
Processing of region of interest (ROI) shapes for
medical image analysis is often encumbered by the poor
results of intensity interpolation when resampling
axially from low to high resolution, e.g. when editing
ROIs using original images with few slices prior to
resampling to high resolution ROI shape images. A
straightforward shape interpolation algorithm is
proposed based on the Radon transform and filtered back
projection. We investigate the capability of this
algorithm to preserve fine image details and to
transversally merge information between the adjacent
slices. Results show interpolating characteristics
greatly superior to intensity interpolation.
|
4300. |
81 |
Attenuation correction for
PET/MR using continuous pseudo-CT derived from MR T1w and
population CT images
Yasheng Chen1, Meher Juttukonda1,
Yi Su2, Tammie Benzinger2, Brian
Rubin3, Yueh Z Lee1, Felipe
Espinoza4, Weili Lin1, Dinggang
Shen1, David S Lalush5, and Hongyu
An1
1Radiology and BRIC, University of North
Carolina at Chapel Hill, Chapel Hill, North Carolina,
United States, 2Radiology,
Washington University in St. Louis, St. Louis, MO,
United States, 3Surgery
and Radiology, Washington University in St. Louis, St.
Louis, MO, United States, 4Radiology,
University of North Carolina at Chapel Hill, Chapel
Hill, North Carolina, United States, 5Biomedical
Engineering, University of North Carolina at Chapel
Hill, Chapel Hill, North Carolina, United States
An atlas based method has been developed to derive
pseudo continuous CT images using MR T1w images for PET
attenuation correction. Population probabilistic map for
air space segmentation and a sparse regression to
enhance the local structure similarity were employed to
achieve an improved AC accuracy.
|
4301.
|
82 |
Dynamic Noise Reduction in
MRI
Jeiran Jahani1, Glyn Johnson1, and
Kamiar Rahnama Rad2
1Department of Radiology, Bernard and Irene
Schwartz Center for Biomedical Imaging, New York
University School of Medicine, New York City, New York,
United States, 2Department
of Statistics, Zicklin School of Business, City
University of New York, New York City, New York, United
States
denoise
|
4302. |
83 |
Model-free spatial
intensity non-uniformity correction algorithm for MR images
Kenichi Ueno1 and
Kang Cheng1
1RIKEN Brain Science Institute, Wako-shi,
Saitama, Japan
MRI images can contain intensity inhomogeneity in space
because of various reasons. Recent progress in MRI
technologies such as multi reception/transmission of RF
and ultra-high-field MRI systems has made this problem
even more serious. Although many types of algorithms
have been proposed and evaluated to deal with the
problem, so far there has been no perfect solution. We
developed a robust algorithm to correct intensity
inhomogeneity of MRI signals without relying on
additional scans. It was demonstrated that our newly
proposed algorithm is very robust and corrects MRI
images with inhomogeneous intensity satisfactorily.
|
4303. |
84 |
Normalization of White
Matter Intensity on T1-weighted Images of Patients with
Acquired Central Nervous System Demyelination
Rezwan Ghassemi1, Robert Brown1,
Brenda Banwell2,3, Sridar Narayanan1,
Kunio Nakamura1, and Douglas Arnold1
1Montreal Neurological Institute, McGill
University, Montreal, QC, Canada, 2The
Children's Hospital of Philadelphia, Philadelphia, PA,
United States,3Neurology, The Hospital for
Sick Children, Toronto, ON, Canada
|
4304. |
85 |
Automatic segmentation of
vessels for MR determination of intracranial pressure
Dustin K Ragan1 and
Jose A Pineda1
1Department of Pediatrics, Washington
University School of Medicine, St. Louis, MO, United
States
We developed a novel segmentation routine for
determining the feeding vessels of the brain from gated
phase-contrast MRI data. This has potential to simplify
MR measurements of vascular flow and ICP.
|
4305. |
86 |
AUTOMATED BRAIN EXTRACTION
IN FETAL MRI BY MULTI-ATLAS FUSION STRATEGY: STUDY ON
HEALTHY AND PATHOLOGICAL SUBJECTS.
Sébastien Tourbier1,2, Xavier Bresson1,2,
Patric Hagmann2, Maud Cagneaux3,
Marie Schaer4, Laurent Guibaud3,
Jean-Philippe Thiran2,5, Reto Meuli2,
and Meritxell Bach Cuadra1,2
1Centre d'Imagerie BioMédicale (CIBM),
Lausanne, Vaud, Switzerland, 2Department
of Radiology, University Hospital Center (CHUV) and
University of Lausanne, Lausanne, Vaud, Switzerland, 3Department
of Radiology, Hôpital Femme-Mère-Enfant (HFME), Lyon,
Rhône, France, 4Department
of Psychiatry, School of Medicine, University of Geneva,
Geneva, Switzerland, 5Signal
Processing Laboratory (LTS5), Ecole Polytechnique
Fédérale de Lausanne (EPFL), Lausanne, Vaud, Switzerland
In fetal brain MRI, most of the high-resolution
reconstruction algorithms rely on brain segmentation as
a preprocessing step. Manual brain segmentation is
highly time-consuming and therefore not a realistic
solution for large-scale studies. Only few works have
addressed this automatic extraction problem. In this
study, we assess the validity of Multiple Atlas Fusion
(MAF) strategies to automatically segment the fetal
brain in MR imaging. We show that MAF performance is
increased in healthy brain by increasing the number of
atlases. Secondly, we also show that MAF can be applied
to pathological brains even when large anatomical
differences are present.
|
4306. |
87 |
Automatic Segmentation of
Thalamic Nuclei with STEPS Label Fusion
Jason Su1,2, Thomas Tourdias2,3,
Manojkumar Saranathan2, and Brian Rutt2
1Electrical Engineering, Stanford University,
Stanford, CA, United States, 2Radiology,
Stanford University, Stanford, CA, United States, 3Neuroradiology,
Bordeaux University Hospital, Bordeaux, Drôme, France
Automatic segmentation of thalamic nuclei using a high
resolution study-specific template and label fusion is
surveyed in a pilot study of multiple sclerosis at 7T.
The template is created from 17 subjects (6 controls, 11
patients) via ANTS and the white matter nulled MPRAGE
contrast shown recently by Tourdias et al. The STEPS
algorithm by Cardoso et al. is employed to segment a new
patient using manual delineations of 6 controls.
Performance in this single case is comparable to other
published methods that require DTI. The Dice
coefficients for whole thalamus (0.87), pulvinar (0.77),
and mediodorsal nucleus (0.71) were notable.
|
4307. |
88 |
An Automatic Guinea Pig
Brain Extraction Method
Jiehua Li1, Jason M Zara1, Rao P
Gullapalli2, and Jiachen Zhuo2
1Electrical and Computer Engineering, George
Washington University, Washington, District of Columbia,
United States, 2Diagnostic
Radiology and Nuclear Medicine, Universit of Maryland
School of Medicine, Baltimore, Maryland, United States
There has been growing number of MRI studies using
guinea pigs as animal models, however there has been no
automatic brain extraction algorithm available for
guinea pig brain extraction. In this study, we describe
a guinea pig brain deformable model method (GBD) based
on our previous rat brain extraction method (RBD). GBD
is a template-based approach with adjusted model
parameters compared to RBD. We validated GBD on 20
guinea pig T2-weighted images and achieved an extraction
accuracy of above 90%.
|
4308. |
89 |
Automatic Bone Segmentation
for Shoulder MRI using Statistical Shape Models
Zhengyi Yang1, Jurgen Fripp2,
Craig Engstrom1, Shekhar Chandra2,
Ying Xia2, Anthony Paproki2, Mark
Strudwick1, Ales Neubert2, and
Stuart Crozier1
1University of Queensland, Brisbane,
Queensland, Australia, 2CSIRO,
Brisbane, Queensland, Australia
In conditions such as shoulder osteoarthritis and
impingement syndrome, it is important to quantify the
subtle changes in the morphology of the glenohumeral
cartilages, which can be measured from image
segmentation. However, automatic cartilage segmentation
from MR images is challenging. As a critical step stone,
we present a fully automatic shoulder bone segmentation
pipeline using statistical shape models. The mean volume
overlap calculated as Dice Similarity Coefficient
between automatic and manual segmentation is 0.94 and
0.76 for humerus and scapula, respectively. These
promising results imply a high likelihood of the
proposed pipeline being integrated into a fully
automatic solution to shoulder cartilage segmentation
and quantitative analysis on cartilage morphometry.
|
4309. |
90 |
Super-Resolution MRI
Reconstruction in Image, Frequency, and Wavelet Domains
Ali Gholipour1, Onur Afacan1, Iman
Aganj2, and Simon K Warfield1
1Department of Radiology, Boston Children's
Hospital and Harvard Medical School, Boston,
Massachusetts, United States, 2Athinoula
Martinos Center for Biomedical Imaging, Massachusetts
General Hospital, Boston, Massachusetts, United States
This educational electronic poster provides an in-depth
review of super-resolution techniques in MRI. This
review discusses techniques based on image, frequency,
and wavelet domains and considers the effect of slice
profile and point spread function estimations on the
performance of reconstruction techniques.
|
4310. |
91 |
A semi-automatic method to
segment visceral, subcutaneous and total fat in the abdomen
from MRI data.
Caroline L. Hoad1, Kathryn Murray1,
Jill Garratt2, Jan Smith2, David
J. Humes2, Susan T. Francis1, Luca
Marciani2, Robin C. Spiller2, and
Penny A. Gowland1
1Sir Peter Mansfield Magnetic Resonance
Centre, University of Nottingham, Nottingham,
Nottinghamshire, United Kingdom, 2Nottingham
Digestive Diseases Centre, NIHR Biomedical Research Unit
in GI and Liver Diseases, University Hospitals NHS Trust
and the University of Nottingham, Nottingham,
Nottinghamshire, United Kingdom
This study describes a semi-automatic segmentation
algorithm to separate subcutaneous, visceral and total
adipose fat from mDIXON MRI data. Data from 10 subjects
with a wide range of BMIs were used to validate the
algorithm. The algorithm used standard image processing
techniques and did not use any training data. Excellent
agreement between the algorithm and manual segmentation
of the same data was found. Bland-Altman analysis found
a small bias in the subcutaneous adipose tissue between
manual and semi-automatic methods. Excellent agreement
was also found between the results of 2 different
observers.
|
4311. |
92 |
3D Multimodal spatial fuzzy
segmentation of intramuscular connective and adipose tissue
from ultralow TE MR images of calf muscle.
Vincent Ugarte1, Vadim Malis1,
Usha Sinha1, Robert Csapo2, and
Shantanu Sinha2
1Physics, SDSU, San Diego, CA, United States, 2Radiology,
UCSD, San Diego, CA, United States
The study of the correlation between muscle loss,
increase of intramuscular adipose (IMAT) and connective
(IMCT) tissues with age is important topic for
understanding how human physiology changes with age. A
Dual echo Ultrashort TE (UTE) sequences is used to map
the very short T2 connective tissue. A 3D spatial fuzzy
c-means segmentation approach is used with intensity and
TE maps and associated structure maps evaluated from the
Hessian tensor. The spatial term was able to classify
tissues in the presence of fairly severe shading
artifact present in the input TE volumes.
|
4312. |
93 |
Computing average cortical
profiles at 3 Tesla
Rene C. W. Mandl1, Martijn P. van den Heuvel1,
Rachel M. Brouwer1, and Hilleke E. Hulshoff
Pol1
1Psychiatry, Brain Center Rudolf Magnus, UMC
Utrecht, Utrecht, Utrecht, Netherlands
Numerous cortical thickness studies using MRI operating
at conventional field strengths (e.g. 3T) showed
cortical reductions for various psychiatric diseases.
But the question of which of the cortical layers were
implicated could not be answered. Here we propose an
automatic method that can extract additional cortical
information from MRI scans acquired at conventional
field strength. Initial experiments indicate that the
method yields robust results and that it can be applied
in large cohort studies to extract more detailed
cortical information.
|
4313. |
94 |
Software pipeline for
thickness profile based morphological analysis of the
midsagittal section of the corpus callosum
Christopher Leslie Adamson1, Richard Leslie
Beare1, Mark Walterfang2, and Marc
Seal1
1Developmental Imaging, Murdoch Childrens
Research Institute, Parkville, VIC, Australia, 2Royal
Melbourne Hospital, Parkville, VIC, Australia
To present a fully automated software pipeline for
thickness profile based morphological analysis of the
midsagittal section of the corpus callosum (CC) using 3D
structural T1-weighted images. This pipeline contains a
novel CC segmentation algorithm that is demonstrated to
be efficient and highly accurate. The pipeline contains
midsagittal slice extraction, CC segmentation, quality
control tools, thickness profile generation, and
group-wise statistical analysis routines with display
scripts. The pipeline is implemented in MATLAB and is
computationally efficient, completing thickness profile
generation in 10 seconds per subject on average.
|
4314. |
95 |
MRI-based Simulation of
Central Brain Atrophy for Evaluation of Brain Atrophy
Measurement Methods
Kunio Nakamura1, Nicolas Guizard1,
Vladimir S. Fonov1, Sridar Narayanan1,
D. Louis Collins1, and Douglas L. Arnold1
1McConnell Brain Imaging Centre, Montreal
Neurological Institute, McGill University, Montreal,
Quebec, Canada
We developed an MRI simulation dataset with accurately
known amount of brain volume and atrophy. We used tissue
probability maps from 20 subjects and simulated central
brain atrophy (enlarging lateral ventricles and
contraction of surrounding brain tissue) by modifying
the probability maps. The MRIs were simulated by mrisim/MINC
(BrainWeb). Using this simulation dataset, we evaluated
common brain atrophy measurement methods (SPM/SIENAX/SIENA/longitudinal
FreeSurfer/Jacobian integration method) against the gold
standard atrophy rates, which were measured from
probability maps. SIENA, Jacobian, and FreeSurfer
performed well in terms of correlation and/or accuracy.
The dataset will be publicly available for validation of
future methods.
|
4315. |
96 |
Measurement of
morphological biomarkers using highly under-sampled k-space
data without image reconstruction: application in
left-ventricular end-diastolic volume assessment
Hamied A Haroon1,2, Ross Little1,2,
Kola Babalola1,2, Chris Miller1,2,
Neal Sherratt1,2, Barry Whitnall1,2,
Tim Cootes1,2, Chris Taylor1,2,
Geoff J Parker1,2, and Chris Rose1,2
1Centre for Imaging Sciences, The University
of Manchester, Manchester, England, United Kingdom, 2Biomedical
Imaging Institute, The University of Manchester,
Manchester, England, United Kingdom
We present a novel method for measuring left-ventricular
end-diastolic volume (EDV) from highly under-sampled k-space,
without need for explicit image reconstruction. Using
retrospectively under-sampled k-space
data (8%), from 31 healthy volunteers, we show that the
method can accurately (r=0.91,p <
0.001) estimate EDV with a mean bias of just 11 ml. The
ability to parameterize features in the way we describe
allows for much faster, tailored quantitative imaging.
|
|
|
|
ELECTRONIC
POSTER SESSION ○ PULSE SEQUENCES & RECONSTRUCTION |
Pulse Sequences & RF
Wednesday 14 May 2014
Exhibition Hall |
11:00 - 12:00 |
|
|
|
Computer # |
|
4316. |
1 |
Comparison of UTE, PETRA
and SPI sequences in MRI of Ancient Remains
Ali Caglar Özen1, Ute Ludwig1,
Lena Maria Öhrström2, Frank Jakobus Rühli2,
and Michael Bock1
1Radiology - Medical Physics, University
Medical Center Freiburg, Freiburg, Germany, 2Centre
for Evolutionary Medicine, Institute of Anatomy,
University of Zürich, Zürich, Switzerland
In this work, MRI of the left hand of an embalmed
Egyptian mummy is implemented with UTE, PETRA and SPI
sequences using a home-made Tx/Rx solenoid coil.
Sequences are compared in their performance of SNR and
extraction of anatomical details. Although PETRA has
higher SNR, UTE reveal anatomical details better. SPI
image is sharper yet it requires long scan times.
Performances of the sequences are evaluated and UTE is
found more suitable to MRI of ancient remains.
|
4317. |
2 |
Multiband Slice Accelerated
TSE: Clinical Applications in Brain imaging
Dingxin Wang1,2, Peter Kollasch1,
Xiufeng Li2, An Vu2, Edward
Auerbach2, Steen Moeller2, Essa
Yacoub2, Kamil Ugurbil2, and
Vibhas Deshpande3
1Siemens Medical Solutions USA, Inc.,
Minneapolis, MN, United States, 2Center
for Magnetic Resonance Research, University of
Minnesota, Minneapolis, MN, United States, 3Siemens
Medical Solutions USA, Inc., Austin, TX, United States
Our study demonstrates the application of multiband
slice accelerated TSE for T2-weighted brain imaging at
3T. Multiband slice acceleration improves the
acquisition efficiency of TSE. Our results suggest the
utility of multiband slice acceleration as a
complementary and/or alternative solution to traditional
1D parallel imaging for time reduction.
|
4318. |
3 |
Acoustic noise reduction in
PD- and T1-weighted TSE-imaging
Martin Ott1, Martin Blaimer1,
Felix Breuer1, David Grodzki2, and
Peter Jakob1,3
1MRB Forschungszentrum für
Magnet-Resonanz-Bayern e.V., Würzburg, Bavaria, Germany, 2Siemens
AG, Erlangen, Bavaria, Germany, 3Department
of Experimental Physics 5, University of Wuerzburg,
Würzburg, Bavaria, Germany
Acoustic noise reduction is an upcoming field in MRI. We
target on the challenging short echo time regime in
TSE-imaging to obtain images with PD- or T1-weighting.
We present present a functionally approach for
significantly reducing acoustic noise without the need
to modify hardware.
|
4319. |
4 |
Comparison of accelerated
T1-weighted whole-brain structural imaging protocols
Pavel Falkovskiy1,2, Daniel Brenner3,
Thorsten Feiweier4, Stephan Kannengiesser4,
Bénédicte Maréchal1,2, Tobias Kober1,2,
Alexis Roche1,5, Kaely Thostenson6,
Denise Reyes6, Matthias Seeger7,
Tony Stoecker3, Matt Bernstein6,
and Gunnar Krueger1,2
1Advanced Clinical Imaging Technology,
Siemens Healthcare IM BM PI, Lausanne, Switzerland, 2CIBM
- AIT, École Polytechnique Fédérale de Lausanne,
Lausanne, Switzerland, 3German
Center for Neurodegenerative Diseases (DZNE), Bonn,
Germany, 4Healthcare
Sector, Siemens AG, Erlangen, Germany,5Department
of Radiology, University Hospital (CHUV), Lausanne,
Switzerland, 6Department
of Radiology, Mayo Clinic, Rochester, Minnesota, United
States, 7Laboratory
for Probabilistic Machine Learning, École Polytechnique
Fédérale de Lausanne, Lausanne, Switzerland
The MPRAGE pulse sequence is often used for structural
brain imaging because of its good GM/WM contrast.
Recently, several strategies beyond conventional
parallel imaging have been proposed that can be applied
to further shorten the several-minute-long 3D whole
brain acquisition time, e.g. 2D-GRAPPA, CAIPIRINHA, and
segmented MPRAGE. This work qualitatively and
quantitatively compares the performance of four 3-minute
MPRAGE variants of the frequently employed 5-minute
ADNI-2 3D brain imaging protocol. All images obtained
with a 3-minute protocol are rated as being of
clinically useful image quality, though the fast
protocols are found to introduce systematic deviations
in automated volumetric measurements.
|
4320.
|
5 |
10-Minute High-Resolution
Whole-Brain T1 Mapping:
A Comparison of Three Candidate Methods
James A. Rioux1, Ives R. Levesque1,2,
Manojkumar Saranathan1, and Brian K. Rutt1
1Radiology, Stanford University, Stanford,
CA, United States, 2Medical
Physics, Oncology, and RI-MUHC, McGill University,
Montreal, QC, Canada
Three methods for whole-brain high-resolution T1 mapping
are evaluated at 7T: 3-TI MPRAGE, MP2RAGE and MP3RAGE.
Each acquires a number of T1-weighted MPRAGE
images, allowing lookup of T1 values
instead of a least-squares fit, and is B1-insensitive
to varying degrees. All acquisitions were matched at
10min total scan time and 1mm isotropic resolution.
MP2RAGE demonstrated the highest T1-to-Noise-Ratio,
while 3-TI MPRAGE had the lowest difference from a
reference map but has reduced T1NR due to the
acceleration required to achieve the desired scan time.
MP3RAGE is a good compromise method, with.higher T1NR
than 3-TI MPRAGE, but higher accuracy than MP2RAGE.
|
4321. |
6 |
Ultra-short Detection Time
Imaging of the Curing of Composites for Dental Care using
Parameter selective T2* MR-Microimaging on a human
UHF-scanner
Andreas Berg1,2 and
Karin Wiesauer3
1Center for Medical Physics and Biomedcial
engineering, Medical University of Viennna, Vienna,
Austria, 2MR
Centre of Excellence, Medical University of Vienna,
Vienna, Austria, 3RECENDT
Research Center for Non-destructive Testing GmbH, Linz,
Austria
The MR-visualization of the very rigid composite
materials for dental care appears to be impossible by MR
methodology based on spin echo detection due to the very
short T2* of the polymer and ceramic compounds. However
we demonstrate here the possibility to visualize the
solidifying process during illumination at high spatial
resolution in these very rigid Biocompatible
polymer-ceramic composites using UTE T2* micro-mapping
on a 7T Ultra-High-Field human scanner. Quality control
analysis allows for the detection of possible sources of
artifacts in UTE-imaging. Inhomogeneities in the
composite as possible source for mechanical failure are
detected.
|
4322. |
7 |
Fast single-shot
three-dimensional k-space acquisition (free factor) with
balanced turbo field-echo imaging for visualization of the
thoracic duct.
- permission withheld
Takakiyo Nomura1, Tetsu Niwa2,
Takashi Okazaki2, Takuya Hara2,
Tatsuya Sekiguchi3, Shuhei Shibukawa2,
Hiroaki Nishio2, Noriharu Yanagimachi2,
and Yutaka Imai2
1Radiology, Tokai University of School of
Medicine, Isehara, Kanagawa, Japan, 2Tokai
University of School of Medicine, Kanagawa, Japan, 3Tokai
University of School of Medicine, Tokai University of
School of Medicine, Japan
Fast single-shot three-dimensional k-space acquisition
(free factor) with balanced turbo field-echo (bTFE) of
the thoracic duct was performed. We compared the
visualization of the thoracicdact among three sequences
(free factor with bTFE, 3D turbo spin-echo sequence, and
conventional bTFE). We divided the thoracic duct into
three segments (upper, middle, and lower). Each segment
was assessed using a five-point scale. We found good
visualization of the thoracic duct using 3D free factor
with bTFE.
|
4323. |
8 |
Novel upper airway
compliance measurement using dynamic golden-angle radial
FLASH
Ziyue Wu1, Yoon-chul Kim2, Michael
C.K. Khoo1, and Krishna S. Nayak2
1Biomedical Engineering, University of
Southern California, Los Angeles, CA, United States, 2Electrical
Engineering, University of Southern California, Los
Angeles, CA, United States
Obstructive sleep apnea (OSA) is a disease characterized
by repetitive upper airway (UA) narrowing or collapse
during sleep. Upper airway compliance, computed as the
change in UA cross-sectional area per unit pressure, is
a measure of airway collapsibility. Invasive fiberoptic
endoscopy has been previously used to measure the UA
area and compliance while recently MRI has been used as
an alternative noninvasive approach. Current 2D
cartesian MRI methods do not provide the spatio-temporal
resolution needed to fully resolve UA collapsing
dynamics during inspiratory load. We demonstrate the use
of dynamic golden-angle radial FLASH imaging in
combination with parallel imaging and compressed sensing
reconstruction to achieve 1mm spatial and 90ms temporal
resolution. From the results, UA dynamic changes can be
better visualized and compliance measurement is more
accurate with finer temporal and spatial resolution.
|
4324.
|
9 |
Intrinsic Diffusion
Sensitivity of the bSSFP Signal: Influence of Strong Phase
Encoding Gradients on Image SNR
Sébastien Bär1, Matthias Weigel1,2,
Jürgen Hennig1, Dominik Von Elverfeldt1,
and Jochen Leupold1
1Department of Radiology, Medical Physics,
University Hospital Freiburg, Freiburg, Germany, 2Radiological
Physics, University of Basel Hospital, Basel,
Switzerland
Sub-millimeter image resolution, necessary in fields
like molecular imaging, requires high gradient
amplitudes of several hundred mT/m, mostly available at
ultra-high field small animal scanner. The associated
high b-values induce strong diffusion effects. Diffusion
effects specific to the phase encoding gradients leading
to modulation of the steady state signal were observed
for a bSSFP sequence. In this work, we could observe an
important loss of SNR in the images by comparing the
theoretical expectation with the measurements.
Simulations confirmed that this loss of SNR is
associated to the diffusion effects of the PE gradients.
|
4325.
|
10 |
Resting state networks
detection, the importance of high temporal resolution: a
comparison study between 2D-EPI, SMS 2D-EPI and 3D-EPI-CAIPI
acquisitions
Mayur Narsude1,2, Wietske van der Zwaag1,
Daniel Gallichan1, Rolf Gruetter1,
and Jose Marques2
1CIBM, EPFL, Lausanne, Vaud, Switzerland, 2University
of Lausanne, Lausanne, Vaud, Switzerland
In this study we evaluate the importance of increased
temporal resolution when analysing resting state
networks. Furthermore, we evaluate the performance of
two alternative approaches to obtain 3-fold acceleration
in terms of temporal resolution in respect to standard
multi-slice 2D-EPI: 3D-EPI-CAIPI and SMS-EPI. Both
accelerated sequences offered improved statistical power
in the RSN detection. Similar RSNs were detected with
3D-EPI-CAIPI and SMS-EPI and both could detect
additional networks compared to standard 2D-EPI.
|
4326. |
11 |
HASTE imaging with
externally optimized skewed saturation pulses for fetal
imaging at 3T - initial results
Borjan Gagoski1, Cornelius Eichner2,
Mukund Balasubramanian3, Himanshu Bhat4,
Kawin Setsompop2, and Patricia Ellen Grant1
1Fetal-Neonatal Neuroimaging & Developmental
Science Center, Boston Children's Hospital, Harvard
Medical School, Boston, MA, United States, 2A.A.
Martinos Center for Biomedical Imaging, Department of
Radiology, Massachusetts General Hospital, Charlestown,
MA, United States, 3Department
of Radiology, Boston Children's Hospital, Harvard
Medical School, Boston, MA, United States, 4Siemens
Healthcare, Charlestown, MA, United States
This work shows preliminary results demonstrating the
feasibility and potential for reducing the readout
length of the HASTE acquisition for 3T fetal imaging
while keeping the original voxel sizes, by applying
outer volume skewed saturation pulses oriented
perpendicular to the PE direction. Further optimization
of the application of spatial saturation pulses in the
pregnant abdomen is yet to be done. We believe that
these methods are promising way to reduce the HASTE
readout length and thus will make the HASTE acquisitions
less susceptible to fetal motion in the future.
|
4327. |
12 |
Time-SLIP with pencil beam
pulse for observing CSF flow dynamics
Shuhei Shibukawa1,2, Toshiaki Miyati2,
Hiroaki Nishio1, Tomoya Nakamura1,
Yutaka Imai3, Testuo Ogino4, and
Isao Muro1
1Department of Radiology, Tokai university
hospital, Isehara, Kanagawa, Japan, 2Division
of Health Science,Graduate School of Medical Sciences,
Kanazawa university, Kanazawa, Ishikawa, Japan, 3Radiology,
Tokai university hospital, Isehara, Kanagawa, Japan, 4Healthcare
department, Philips electronics Japan, minato-ku, Tokyo,
Japan
In MRI, Yamada et al. reported a method which used
Time-SLIP other than observation of CSF flow dynamics
using phase contrast technique. we used a pencil beam
pulse as the selective pulse to improve the selectivity
of the target region in Time-SLIP. We report the
validation results for CSF flow dynamics observations in
comparison with Time-SLIP with pencil beam pulse (PB
Time-SLIP) and that with slab pulse (SP Time-SLIP). In
the flow phantom, it was found that pencil beam pulse
was affected by the irradiation time prolonged at high
flow rate. In human study, no significant difference was
found in observation of CSF flow dynamics between SP
Time-SLIP and PB Time-SLIP. In the case of slow flow
rates such as CSF, PB Time-SLIP enables more selective
visualization than SP Time-SLIP.
|
4328. |
13 |
A k-space approach to
designing multi-dimensional frequency modulated pulses for
spatiotemporal MRI
Albert Jang1,2, Naoharu Kobayashi1,
Jianyi Zhang1,3, and Michael Garwood1
1Center for Magnetic Resonance Research and
Department of Radiology, University of Minnesota,
Minneapolis, MN, United States, 2Department
of Electrical and Computer Engineering, University of
Minnesota, Minneapolis, MN, United States, 3Cardiovascular
Division, Department of Medicine, University of
Minnesota, Minneapolis, MN, United States
Using the low-tip angle approximation based k-space
formulation, a two-dimensional frequency modulated (2D
FM) pulse has been designed for spatiotemporal MRI.
Utilizing a spiral k-trajectory and radial symmetry, the
2D FM pulse selectively excites a cylindrical-shaped
volume by sweeping the resonance region along a spiral
trajectory during the pulse for spatiotemporal encoding.
Furthermore, simulation and experimental results show
that these pulses are able to maintain spatial
selectivity even in the presence of frequency offsets
that arise from chemical shifts and/or B0 inhomogeneity.
|
4329. |
14 |
MPgCG: An Iterative RF
Pulse Design Method for Excitation using Nonlinear Gradient
Fields
Emre Kopanoglu1, Leo K. Tam1,
Haifeng Wang1, and Robert Todd Constable1
1Dept. Diagnostic Radiology, Yale University
School of Medicine, New Haven, Connecticut, United
States
Spatial encoding functions (SEFs) generated using
nonlinear gradient fields (NLGFs) have curved spatial
patterns. In Cartesian coordinates, such SEFs are
non-orthogonal, which may lead to undesired flip-angle
variations in excitation profiles. Although such effects
can be suppressed using coordinate transformations, such
a transformation may introduce loss-of-detail and
introduce undesired constraints on RF pulse design. In
this study, an iterative method that utilizes
Matching-Pursuit and Conjugate-Gradient algorithms to
design RF pulses in Cartesian coordinates is proposed.
The method is compared to MP and CG algorithms, as well
as non-iterative pulse design using nonlinear coordinate
transformations, using simulations.
|
4330. |
15 |
Dynamic kT-points:
a new concept to improve T2-weighted imaging at
7T
Florent Eggenschwiler1, Kieran R. O'Brien2,3,
Bénédicte Maréchal3,4, Rolf Gruetter1,2,
and José P. Marques5
1Laboratory for Functional and Metabolic
Imaging, Ecole Polytechnique Fédérale de Lausanne,
Lausanne, Vaud, Switzerland, 2Department
of Radiology, University of Geneva, Geneva, Geneva,
Switzerland, 3CIBM
- AIT, École Polytechnique Fédérale de Lausanne,
Lausanne, Vaud, Switzerland, 4Advanced
Clinical Imaging Technology, Siemens H IM BM PI,
Lausanne, Vaud, Switzerland, 5Department
of Radiology, University of Lausanne, Lausanne, Vaud,
Switzerland
At high field, the B1+ inhomogeneity
causes undesirable signal and contrast variations across
the brain. It has been shown that those artifacts can be
corrected by designing a single kT-point
pulse in the STA regime to replace all the hard pulses
of a TSE sequence. In this work, to further improve T2-weighted
imaging, a specific kT-point pulse is
designed for each sequence pulse (dynamic kT-point
design). KT-points were thus included to the
SR-EPG formalism in order to optimize the magnetization
state throughout the TSE sequence such that the signal
across the brain matches the targeted one for each
sequence echo.
|
4331. |
16 |
Tailored RF pulse design
method for CPMG sequences
Shaihan J Malik1 and
Joseph V Hajnal1,2
1Division of Imaging Sciences and Biomedical
Engineering, Kings College London, London, London,
United Kingdom, 2Centre
for the Developing Brain, Kings College London, London,
United Kingdom
In fast spin echo (FSE) sequences pathways that meet the
CPMG condition (90° phase between excited magnetization
and refocusing pulses) are sustained, whereas non-CPMG
pathways die away. We explore the suppression of non-CPMG
pathways as an additional design flexibility for
localized excitation pulses for inner-volume 3D-FSE
imaging. The RF design problem is reformulated by
splitting real and imaginary components and then a
weighted optimization is used to unevenly distribute
error to the non-CPMG channel. The approach is tested by
designing multi-dimensional localized excitation pulses
for a 3D-FSE imaging sequence and is shown to reduce
excitation error and preserve background suppression.
|
4332. |
17 |
Design of parallel
transmission pulses in the presence of RF errors
Adrian Martin1, Bastien Guerin2,
Yigitcan Eryaman2,3, Joaquin L Herraiz3,
Borjan Gagoski4, Elfar Adalsteinsson5,6,
Lawrence L. Wald2,6, and Emanuele Schiavi1
1Applied Mathematics, Universidad Rey Juan
Carlos, Mostoles, Madrid, Spain, 2Radiology,
Martinos Center, Massachusetts General Hospital,
Charlestown, Massachusetts, United States, 3Madrid-MIT
M+Vision Consortium in RLE, Massachusetts Institute of
Technology, Cambridge, Massachusetts, United States, 4Fetal
Neonatal Neuroimaging & Developmental Science Center,
Boston Children’s Hospital, Harvard Medical School,
Boston, Massachusetts, United States, 5Electrical
Engineering and Computer Sciences, Massachusetts
Institute of Technology, Cambridge, Massachusetts,
United States, 6Health
Sciencies and Technology, Massachusetts Institute of
Technology, Cambridge, Massachusetts, United States
Despite of the recent advances in parallel transmission
RF pulse design for local and global SAR management, to
the best of our knowledge errors in the transmit chain
have never been taken into account. We present a method
to design pTx pulses that satisfy the SAR limits using
the knowledge about the transmit chain fidelity. This
method has been validated for spokes pulses using
simulated data for a 3Tbody coil with 8 Tx channels and
a 7T head array with 8 channels.
|
4333. |
18 |
Slab-wise parallel transmit
multiband RF pulse design for simultaneous multislice
imaging with volumetric coverage
Xiaoping Wu1, Sebastian Schmitter1,
Kamil Ugurbil1, and Pierre-Francois Van de
Moortele1
1CMRR, Radiology, University of Minnesota,
Minneapolis, Minnesota, United States
Simultaneous MultiSlice (SMS) MR imaging using MultiBand
(MB) RF pulses is playing an increasingly important role
in neuroimaging. Recently, we have proposed a slice-wise
parallel transmit (pTx) MB pulse design that can be used
to improve transmit B1 homogeneity and/or reduce RF
power consumption relative to a single channel Circular
Polarized mode application. However, directly utilizing
this slice-wise approach and designing pTx MB pulses in
a slice-by-slice fashion for all necessary imaging
slices for covering a large volume of interest, such as
the whole brain, is impractical within clinical time
constraints with current instrumentation, especially
when using high through-plane spatial resolutions. In
the present study, we propose a novel, effective and
practical slab-wise pTx MB pulse design targeting
volumetric coverage in SMS/MB imaging and describe some
of its important properties by designing RF pulses based
on electromagnetic modeling of a head array at 7T.
|
4334. |
19 |
Joint multi-shift and
Magnitude Least Squares (msMLS) algorithm for time efficient
low SAR and low peak RF pulse design
Alessandro Sbrizzi1, Shaihan J Malik2,
Cornelis A van den Berg3, Peter R Luijten3,
and Hans Hoogduin3
1UMC Utrecht, Utrecht, NL, Netherlands, 2King’s
College London, London, United Kingdom, 3UMC
Utrecht, Utrecht, Netherlands
During the last decade, several numerical methods for RF
pulse design have been developed. Recently, the
magnitude least squares (MLS) and the multi-shift
conjugate gradient least squares (msCGLS) algorithms
have been proposed to relax the phase constraint in the
resulting magnetization and to efficiently design RF
pulses with minimum power. In this study, we present a
multi-shift MLS (msMLS) algorithm which presents both
advantages of the MLS and the multi-shift approach
|
4335. |
20 |
Mitigate B1+ inhomogeneity
by the combination of RF shimming and B1+ remapping using
nonlinear gradient coils
Yi-Cheng Hsu1, Ying-Hua Chu1,
Riccardo Lattanzi2, Daniel K Sodickson2,
and Fa-Hsuan Lin1,3
1Institute of Biomedical Engineering,
National Taiwan University, Taipei, Taiwan, 2The
Bernard and Irene Schwartz Center for Biomedical
Imaging, Department of Radiology, New York University
School of Medicine, NY, United States, 3Aalto
University, Finland
To mitigate B1+ inhomogeneity in high field MRI, we
proposed to combine RF shimming and B1+ remapping using
SpAtially selective RF excitation with Generalized
Spatial encoding magnetic fields (SAGS) method. Using
both numerical simulations and experimental data, we
demonstrate that such a combined strategy can provide
the most homogeneous transverse magnetization
distribution without the complexity of a full parallel
RF transmission system. Compared to using RF shimming
alone, our method can improve B1+ inhomogeneity by
approximately 50% in simulations and 30% in experimental
data.
|
4336. |
21 |
Encoding Methods for B1+ Mapping
in Parallel Transmission Systems at Ultra High Field
Desmond H. Y. Tse1, Michael S. Poole1,
Arthur W. Magill1, Jörg Felder1,
Daniel Brenner1,2, and N. Jon Shah1,3
1INM - 4, Research Centre Jülich GmbH,
Jülich, Germany, 2German
Center for Neurodegenerative Diseases (DZNE), Bonn,
Germany, 3Department
of Neurology, RWTH Aachen University, Aachen, Germany
Four different encoding methods for B1+ mapping
in parallel transmission system, namely 1-channel-on,
all-channels-on-except-1, all-channels-on-1-inverted and
RF phase encoding (PE), were evaluated using dual
refocusing acquisition mode (DREAM) at 9.4 T. RF PE,
which encodes each transmit channel by phase rotation,
was the least susceptible to artefacts caused by
destructive RF interference. It showed negligible
dependency on the initial RF phase setting and provides
a flexible way to increase the number of measurements to
increase SNR and reduce artefacts by weighted decoding.
These advantages of RF PE make it a good choice for B1+ mapping
at ultra high field.
|
4337. |
22 |
Ultra-fast B1+ Mapping
allows Speeding up RF Shimming in Body MRI at 3T
Alois Martin Sprinkart1,2, Georg Schmitz2,
Frank Träber1, Wolfgang Block1,
Jürgen Gieseke3, Hans Schild1,
Peter Börnert4,5, and Kay Nehrke4
1Dept. of Radiology, University of Bonn,
Bonn, Germany, 2Institute
of Medical Engineering, Ruhr-University Bochum, Bochum,
Germany, 3Philips
Healthcare, Hamburg, Germany, 4Philips
Research Laboratory, Hamburg, Germany, 5Dept.
of Radiology, LUMC, Leiden, Netherlands
To test if the recently proposed ultra-fast B1+ mapping
approach DREAM is applicable in clinical routine for
patient-adaptive radiofrequency(RF)-shimming in body MRI
at 3T, the performance of DREAM, double-angle (DA), and
actual-flip-angle (AFI) B1+ mapping
methods was compared in 10 volunteers. Therefore,
RF-shimsets obtained by DA-, AFI-, and DREAM- based B1+ calibration
data were analyzed by AFI- based B1+ mapping.
Results suggest that DREAM-based RF-shimming yields
similar results as DA and AFI with respect to both, flip
angle accuracy and B1+ homogeneity,
while the total acquisition time of the calibration
sequence is shortened from one or two long breath-holds
to about 1 second when DREAM is applied.
|
4338. |
23 |
Magnetization Prepared
DREAM for Fast Flow-Robust B1+ Mapping
Peter Börnert1,2, Kay Nehrke1, and
Jinnan Wang3
1Philips Research, Hamburg, Germany, 2Radiology,
LUMC, Leiden, Netherlands, 3Philips
Research North America, Briarcliff Manor, New York,
United States
Fast and robust in vivo B1+ mapping is an essential
prerequisite for multi-element transmit applications
like RF-shimming and transmit SENSE. DREAM, a recently
introduced B1+ mapping approach, is very fast and
promising, allowing single shot B1+ mapping within a
fraction of a second. However, DREAM might be sensitive
to flow which potentially degrades the B1+ maps for the
blood pool signal in large vessels and in the heart. In
the present work this has been solved successfully by
adding an efficient and robust magnetization preparation
approach which is studied in detail here for high field
applications.
|
4339. |
24 |
An RF Spoil Regime for
Steady-State DREAM B1+ Mapping
Kay Nehrke1 and
Peter Börnert1
1Philips Research, Hamburg, Germany
In the present work, an efficient RF spoiling scheme is
theoretically deduced for the DREAM B1+ mapping
sequence. It allows a frequent re-acquisition of data
from the same location without accuracy degradation due
to the formation of a steady state. The performance of
the approach is investigated in simulations and
demonstrated in phantom experiments.
|
|
|
|
ELECTRONIC
POSTER SESSION ○ PULSE SEQUENCES & RECONSTRUCTION |
Motion Correction
Wednesday 14 May 2014
Exhibition Hall |
11:00 - 12:00 |
|
|
|
Computer # |
|
4340. |
25 |
Calibration and quality
assurance for optical prospective motion correction using
active markers
Julian Maclaren1, Melvyn B. Ooi1,
Murat Aksoy1, Jakob Ehrl1, and
Roland Bammer1
1Dept. of Radiology, Stanford University,
Stanford, CA, United States
In this work, we present a fast means to calibrate an
optical tracking system used for prospective motion
correction. A calibration tool comprising wireless
active markers and an optical marker is used to
simultaneously measure motion in both coordinate
systems. A ‘hand-eye calibration’, often used in
robotics, is then applied to compute the required
coordinate transformation. Other quality assurance
information, such as optical system latency, accuracy
and precision can be derived from the same data.
|
4341. |
26 |
Quantitative evaluation of
two marker fixation systems for prospective motion
correction
Nicolas Adrien Pannetier1,2, Theano Stravinos2,
Peter Ng2, Michael Herbst3, Maxim
Zaitsev3, Gerald Matson1,2, and
Norbert Schuff1,2
1Department of Radiology and Biomedical
Imaging, University of California San Francisco, San
Francisco, CA, United States, 2Centre
for Imaging of Neurodegenerative Diseases, VA Medical
Center, San Francisco, CA, United States, 3Department
of Radiology, University Medical Center Freiburg,
Freiburg, Germany
Motion artifacts in MRI images can be reduced with
prospective motion correction system. However, results
are sensitive to the accuracy of the motion tracking
system and finding a sensitive metric for quantifying
the effectiveness of the correction has been elusive. We
tested two different marker positions; either mounted on
the nose bridge or mounted on a mouth guard, and
proposed a quantitative approach to compare
effectiveness of motion correction. We found that the
mouth guard outperforms the nose bridge fixation for
accurately tracking the head motion and produce
motion-free images.
|
4342. |
27 |
Correction of fast motion
by field monitoring in the head frame of reference
Alexander Aranovitch1,2, Maximilian Haeberlin1,
Axel Haase2, and Klaas Paul Pruessmann1
1Institute for Biomedical Engineering,
University and ETH, Zurich, Zurich, Switzerland, 2Zentralinstitut
für Medizintechnik, Technische Universität München,
Munich, Bavaria, Germany
Very fast ehad motion cannot be neglected in long
readouts such as single-shot EPI. The resulting k-space
trajectory distortions cause image artefacts such as
blurring, ghosting and geometric distortions if left
untreated. Concurrent field monitoring in the head frame
of reference is proposed to correct for fast motion
during an EPI readout. Potential applications include
tremor patients and other non-cooperative patients.
|
4343. |
28 |
Motion Corrected Radial MP-nRAGE
Steven Kecskemeti1 and
Andrew L Alexander2
1Waisman Center, University of Wisconsin,
Madison, WI, United States, 2Medical
Physics, University of Wisconsin, WI, United States
Conventional MPRAGE (Magnetization-Prepared Rapid
Gradient Echo) T1w acquisitions are highly sensitive to
head motion and physiologic motions from flow and eye
movements. The PROPELLER technique2 original introduced
for T2 weighted imaging and later modified for T1 FLAIR
imaging3 corrects well for in-plane motion, but not for
through plane motion. The aim of this work is to develop
a technique for T1w imaging that is (1) less sensitive
to motion (2) can detect motion in 3D and finally (3)
can retrospectively correct for occasional 3D motions
from twitching, swallowing, coughing, or adjusting for
comfort.
|
4344. |
29 |
Inherent Correction of
Rigid-Body Motion in Fast Spin-Echo Imaging
Shayan Guhaniyogi1, Hing-Chiu Chang1,
Mei-Lan Chu1, Allen W. Song1, and
Nan-Kuei Chen1
1Brain Imaging and Analysis Center, Duke
University, Durham, North Carolina, United States
Fast Spin-Echo (FSE) images are routinely acquired
clinically due to their contrast range and fast
acquisition. In the presence of rigid-body patient
motion, however, the excitations in FSE correspond to
different patient positions, resulting in
motion-corrupted images when using standard
reconstruction. Here we present a reconstruction method
which can inherently estimate the level of rigid-body
motion in FSE data, and produce images without blurring
and artifacts. We demonstrate that the method provides
better image quality than conventional reconstruction in
the presence of rigid-body motion, and is useful for
clinical FSE investigations requiring high quality
images free of motion corruption.
|
4345. |
30 |
Overproof GRAPPA:
Exploiting the natural sparsity of fat images for 64-times
accelerated motion navigators (FatNavs)
Daniel Gallichan1, José P Marques2,
and Rolf Gruetter1,3
1CIBM-AIT, EPFL, Lausanne, VD, Switzerland, 2Dept.
of Radiology, University of Lausanne, VD, Switzerland, 3Depts.
of Radiology, Universities of Lausanne and Geneva,
VD/GE, Switzerland
We recently demonstrated that the natural sparsity of
fat images of the human head can be used to achieve
extremely high acceleration factors. Here we demonstrate
that this also allows conventional GRAPPA
reconstructions at 64x acceleration, and use this for a
motion navigator in a high-resolution MP-RAGE structural
scan.
|
4346. |
31 |
Motion artefact correction
in quantitative MRI (qMRI) by linear relaxometry modelling
Martina F. Callaghan1, Siawoosh Mohammadi1,
and Nikolaus Weiskopf1
1Wellcome Trust Centre for Neuroimaging, UCL
Institute of Neurology, London, United Kingdom
Quantitative MRI (qMRI) with high resolution and whole
brain coverage is sensitive to motion artefacts because
of typically long acquisition times. We used a
multi-parameter mapping (MPM) protocol to acquire
quantitative maps of longitudinal relaxation rate (R1),
magnetisation transfer (MT) and effective transverse
relaxation rate (R2*). These quantitative maps were
combined in a linear relaxometry model to reduce motion
artefacts by exploiting the inconsistent manifestation
of the artefacts across the maps.
|
4347. |
32 |
Motion Effects during
Single-Shot Acquisition
Benjamin Zahneisen1, Brian Keating1,
Aditya Singh1, and Thomas Ernst1
1University of Hawaii, Honolulu, HI, United
States
Single-shot echo-planar imaging (EPI) is commonly
assumed to be immune to subject motion. However, head
movements can reach velocities in the 100mm/s or 100°/s
range [1], resulting in translations and rotations of
several mm or ° over the course of a typical readout
train (tens of ms). Therefore, a simulation was
performed to determine the effect of such fast movements
on EPI scan quality.
|
4348. |
33 |
Pulsatile Motion
Suppression using Cine Fast Spin Echo and Non-Linear Image
Reconstruction
Mari Elyse Boesen1,2, Jerome Yerly2,3,
Robert Marc Lebel2,4, and Richard Frayne2,5
1Biomedical Engineering, University of
Calgary, Calgary, AB, Canada, 2Seaman
Family MR Research Centre, Calgary, AB, Canada, 3CardioVascular
MR Research Center, Centre d'Imagerie BioMedicale,
Lausanne, Switzerland, 4Applied
Sciences Laboratory, GE Healthcare, AB, Canada, 5Radiology
& Clinical Neuroscience, Hotchkiss Brain Institute,
University of Calgary, AB, Canada
Brain pulsation with the cardiac cycle is a limiting
factor in artifact-free high-resolution brain imaging. A
non-uniformly sampled k-space
with oversampled low frequency data reduced the effect
of pulsatile motion. Further artifact reduction was
achieved by retrospectively gating this non-uniformly
sampled FSE data (cineFSE) and removing the components
that demonstrated significant temporal variation.
|
4349. |
34 |
A new, highly effective
slicewise motion correction for BOLD MRI: SLOMOCO
Erik Beall1 and
Mark Lowe1
1Imaging Institute, Cleveland Clinic,
Cleveland, OH, United States
Head motion artifact is a major unsolved problem for
fMRI and fcMRI. The primary reason why current methods
do not solve motion is the limitation of
volume-synchronized or -interpolated motion. Real motion
happens at the slice level, and this has been shown to
seriously limit accuracy of volumetric measures.
Improved correction requires knowledge of slice-level
motion, and in a major advance for the field, we present
an algorithm that obtains this. Using a motion-injection
sequence to acquire realistic motion-corrupted data in
cadavers, we show the algorithm obtains the known motion
parameters with accuracy on the level of external
trackers.
|
4350. |
35 |
Diffusion Weighted MRI of
Moving Subjects based on Motion-Induced Random Oversampling
Ali Gholipour1, Onur Afacan1,
Benoit Scherrer1, Burak Erem1, and
Simon K Warfield1
1Department of Radiology, Boston Children's
Hospital and Harvard Medical School, Boston,
Massachusetts, United States
An image based motion correction and reconstruction
approach has been developed for diffusion weighted
imaging of subjects that move continuously and
irregularly during scans. Subject motion poses random
sampling in image space and q-space. We purposely
perform oversampling to achieve sufficient coverage of
the image space and q-space under motion conditions.
|
4351. |
36 |
Simultaneous Correction of
Motion-Induced Artifacts and Diffusion-Encoding Corruption
in Multishot Diffusion Tensor EPI
Shayan Guhaniyogi1, Mei-Lan Chu1,
Hing-Chiu Chang1, Allen W. Song1,
and Nan-Kuei Chen1
1Brain Imaging and Analysis Center, Duke
University, Durham, NC, United States
Multishot diffusion tensor EPI offers several advantages
over singleshot acquisitions, including improved spatial
resolution and reduced geometric distortions. However,
it also has increased sensitivity to patient motion.
While phase errors and pixel misregistrations among
shots are commonly addressed in correction schemes, the
altered diffusion-encoding of each shot due to motion is
often neglected. We therefore present a new
reconstruction technique to correct all three
motion-induced errors in multishot diffusion EPI. The
technique is shown to improve both image quality and
tensor calculations, and is expected to be valuable for
clinical and neuroscience applications requiring
accurate high resolution diffusion tensor information.
|
4352. |
37 |
Enhanced DC Self-Navigator
with Multi-Slice Signal Combination Method
Yuji Iwadate1, Anja C.S. Brau2,
and Hiroyuki Kabasawa1
1Global MR Applications and Workflow, GE
Healthcare Japan, Hino, Tokyo, Japan, 2Global
MR Applications and Workflow, GE Healthcare, Munich, DE,
Germany
The self-navigator gating technique with the k-space
center (DC) signal has less navigator signal
deterioration than the conventional pencil-beam
navigator gating when high imaging flip angles are used.
We combined DC signals from the superior slices to
improve respiratory motion detection in DC-based
self-navigator sequence. The proposed method was tested
with a 2D SPGR sequence, and it averaged DC signal
fluctuations caused by spin saturation differences and
cardiac motion, which resulted in improved motion
detection and correction.
|
4353. |
38 |
Optimizing Navigator Flip
Angle for Free-Breathing Fat-Fraction and R2* Quantification
of the Liver
James H. Holmes1, Diego Hernando2,
Yuji Iwadate3, Ann Shimakawa4,
Gavin Hamilton5, Utaroh Motosugi2,
and Scott B Reeder2,6
1Global MR Applications and Workflow, GE
Healthcare, Madison, WI, United States, 2Radiology,
Univeristy of Wisconsin-Madison, Madison, WI, United
States,3Global MR Applications and Workflow,
GE Healthcare, Hino, Tokyo, Japan, 4Global
MR Applications and Workflow, GE Healthcare, Menlo Park,
CA, United States, 5Radiology,
University of California San Diego, San Diego, CA,
United States, 6Medical
Physics, University of Wisconsin-Madison, Madison, WI,
United States
Fat and R2* quantification methods, in combination with
free-breathing navigator-based methods provide a
significant advantage for accommodating patients by
removing the need for breath-holding. A trade-off exists
between high signal for navigator motion detection and
high steady-state signal for imaging without introducing
T1 bias. This work evaluates the measured fat-fraction
and R2* as a function of navigator flip angle. Results
suggest the navigator excitation flip angle should be 10
degrees or lower to minimize fat-fraction bias at the
location of the navigator excitation and enable
fat-fraction and R2* measurements in good agreement with
stationary phantoms.
|
4354. |
39 |
Free-Breathing T2 weighted
liver Imaging using Retrospective Motion Compensation
Shujing Cao1, Feng Huang2, Bida
Zhang3, and Rui Li1
1Center for Biomedical Imaging Research,
School of Medicine, Tsinghua University, Beijing,
Beijing, China, 2Philips
Healthcare, Gainesville, FL, United States,3Philips
Research China, Beijing, China
An effective retrospective motion compensation method
using iterative k-space convolution and selective coil
combination was proposed for free breathing T2 weighted
liver imaging without acquisition interruption. By
iteratively implementing the GRAPPA like k-space
convolution with gradually improved convolution kernel,
widespread respiration motion induced errors can be
sufficiently dispersed and cancelled out. Convergence of
the designed image index was adopted to adaptively
terminate the iteration. Meanwhile data from coil
elements with low sensitivity to motion was selectively
kept during iteration to preserve the signal noise ratio
(SNR). In-vivo studies demonstrated its robustness in
artifact reduction.
|
4355. |
40 |
Image co-registration for
respiratory triggered and non-triggered DTI of the
transplanted kidney
Maryam Seif1, Laila Yasmin Mani2,
Huanxiang Lu3, Mauricio Reyes3,
Bruno Vogt2, Chris Boesch1, and
Peter Vermathen1
1Depts Clinical Research and Radiology,
University of Bern, Bern, Bern, Switzerland, 2Dept.
Nephrology, Hypertension and Clinical Pharmacology,
Inselspital Bern, Bern, Bern, Switzerland, 3Institute
for Surgical Technology and Biomechanics, University of
Bern, Bern, Bern, Switzerland
DTI-scans are performed employing respiratory-triggering
in native kidneys to reduce severe physiological motion
artifacts caused by respiration. Previous diffusion
measurements in transplanted kidneys have been performed
with and without controlling for respiratory motion. The
aim of this study was to investigate if performing
co-registration on non-triggered DTI may allow omitting
respiratory triggering for transplanted kidneys. The
clear improvement due to co-registration and the small
difference between triggered and non-triggered images
suggest that patients with renal allografts can be
measured without respiratory triggering, but employing
co-registration to improve the stability.
|
4356. |
41 |
3D Golden Angle
Through-Time Radial GRAPPA with Self-Navigation for High
Resolution 3D Abdominal Imaging
Wei-Ching Lo1, Jesse I. Hamilton1,
Kestutis J. Barkauskas1, Katherine L. Wright1,
Yong Chen2, Mark A. Griswold1,2,
Nicole Seiberlich1, and Vikas Gulani1,2
1Biomedical Engineering, Case Western Reserve
University, Cleveland, OH, United States, 2Radiology,
University Hospitals Case Medical Center\Case Western
Reserve University, Cleveland, OH, United States
3D abdominal MR imaging at high spatial resolution
requires long breathholds to avoid motion artifacts.
This study presents the combination of a 3D golden angle
radial trajectory and non-Cartesian parallel imaging for
high-resolution abdominal imaging. This trajectory
provides a ¡§self-navigation¡¨ signal to detect the
inevitable transition from breathhold to free-breathing,
and the golden angle radial trajectory yields nearly
uniform angular undersampling regardless of breathhold
duration. This method can automatically and
retrospectively provide clinically useful images even in
the presence of motion while preserving high resolution
for 3D abdominal imaging.
|
4357. |
42 |
Improved Spiral first-pass
perfusion imaging with Motion-Corrected Compressed Sensing
Yang Yang1, Craig H Meyer1,2,
Christopher M Kramer2,3, and Michael Salerno2,3
1Biomedical Engineering, University of
Virginia, Charlottesville, VA, United States, 2Radiology,
University of Virginia, Charlottesville, VA, United
States,3Medcine, University of Virginia,
Charlottesville, VA, United States
Compressed sensing (CS) has shown promise for highly
accelerated first-pass perfusion imaging. However CS
techniques suffer from temporal blurring in the presence
of respiratory motion which is inevitable in clinical
breath-held perfusion scans. Spiral pulse sequences have
multiple advantages for myocardial perfusion imaging and
their relatively incoherent aliasing pattern is
advantageous for CS reconstruction. We have developed a
parallel imaging and CS reconstruction technique for
spiral first-pass perfusion imaging which incorporates a
registration operator directly into the reconstruction
model and thus outputs a series of motion-free perfusion
images. We demonstrate high image quality and robustness
to respiratory motion.
|
4358. |
43 |
Comparison of image-based
and reconstruction-based respiratory motion correction
techniques for 3D whole-heart MRI
Nadia Paschke1, Olaf Dössel1,
Tobias Schaeffter2, Claudia Prieto2,
and Christoph Kolbitsch2
1Institute of Biomedical Engineering,
Karlsruhe Institute of Technology, Karlsruhe,
Baden-Württemberg, Germany, 2Division
of Imaging Sciences and Biomedical Engineering, King’s
College London, London, United Kingdom
Navigator-gated acquisitions are in general used in 3D
whole-heart MRI to reduce respiratory motion artefacts
with the final scan time depending strongly on the
breathing pattern of the subject. Motion correction
approaches have been proposed to avoid these subject
dependencies and ensure fast 3D high-resolution scans
due to increased scan efficiency. Here two different
respiratory motion correction techniques are compared in
4 volunteers and results show that incorporating motion
information directly into an iterative reconstruction
leads to the best image quality with a similar depiction
of the coronary arteries and a scan time reduction of
43% compared to respiratory gating.
|
4359. |
44 |
Achieving 3D CINE from free
breathing multi-slice 2D acquisitions via Simultaneous
Groupwise Manifold Alignment
Muhammad Usman1, Christian Baumgartner1,
Andrew King1, David Atkinson2,
Tobias Schaeffter1, and Claudia Prieto1,3
1Division of Imaging Sciences and Biomedical
Engineering, King's College London, London, Greater
London, United Kingdom, 2Department
of Image Computing, University College London, London,
United Kingdom, 3Escuela
de Ingenieria, Pontificia Universidad Catolica de Chile,
Santiago, Chile
Multislice 2D CINE MRI is a common approach for
assessing cardiac function and anatomy. This approach
requires multiple breath-holds and usually suffers from
slice-misalignments due to motion between the
acquisitions. To overcome these problems, free-breathing
respiratory-gated 3D CINE MRI have been proposed.
However, these methods require long acquisition times
and suffer from poorer contrast between blood and
myocardium than 2D acquisitions1. In this work, we
propose to combine the contrast of 2D acquisitions with
the coverage of the 3D scans by generating a “simulated
3D” scan. This is achieved by addressing the issue of
misalignment, which can occur between different slices
in a multi-slice acquisition, using a self-gated
Simultaneous Groupwise Manifold Alignment (SGA)
technique. Prospective golden radial cardiac MR
acquisitions, performed in 3 volunteers, demonstrate the
feasibility of proposed framework to achieve gated
“simulated 3D” CINE from free-breathing multi-slice 2D
acquisitions.
|
4360. |
45 |
A Robust and Automatic
Cardiac and Respiratory Motion Detection Framework for
Self-Navigated Radial MRI
Li Feng1, Daniel K Sodickson1, and
Ricardo Otazo1
1Bernard and Irene Schwartz Center for
Biomedical Imaging, Department of Radiology, New York
University, School of Medicine, New York, New York,
United States
Self-navigation provides an alternative to ECG
triggering/gating in cardiac MRI and has been used in
radial imaging where inherent navigator signal is
obtained from the centers of k-space. However, this
signal, which is an average of image over entire FOV,
includes unwanted signals outside the region of interest
and reduces the capability of accurate motion detection,
particularly for patients with arrhythmias or irregular
breathing. This study proposes a novel approach to
automatic detect both respiratory and cardiac signal for
free-breathing cardiac imaging by restricting the radial
spokes to include signal from only region of interest
based on the Fourier-slice theorem.
|
4361. |
46 |
High Resolution Respiratory
Self-Gated Golden Angle Cardiac MRI: Comparison of
Self-Gating Methods in Combination with k-t SPARSE SENSE
Jan Paul1, Evica Divkovic1, Stefan
Wundrak1, Peter Bernhardt1,
Wolfgang Rottbauer1, Heiko Neumann2,
and Volker Rasche1
1Internal Medicine II, University Hospital of
Ulm, Ulm, Germany, 2Institute
of Neural Information Processing, University of Ulm,
Ulm, Germany
Several methods for self-gating (SG) are described in
literature. However, to our knowledge, no comprehensive
comparison of these variants has been performed yet. We
compare different respiratory self-gating methods from
radial acquisition by means of increase in image
sharpness relative to non-gated reconstructions. In
addition, high temporal resolution k-t SPARSE SENSE
reconstruction of the gated data is investigated, which
reveals more details of the heart motion.
|
4362. |
47 |
Manifold Learning based
ECG-free free breathing cardiac MRI for highly accelerated
CINE
Muhammad Usman1, David Atkinson2,
Tobias Schaeffter1, and Claudia Prieto1,3
1Division of Imaging Sciences and Biomedical
Engineering, King's College London, London, Greater
London, United Kingdom, 2Department
of Image Computing, University College London, London,
United Kingdom, 3Escuela
de Ingenieria, Pontificia Universidad Católica de Chile,
Santiago, Chile
Manifold learning approaches can be applied in MRI to
extract meaningful dimensions (manifolds) from the
high-dimensional set of images. In this work, we propose
a novel manifold learning based framework for cardiac
and respiratory self-gating cardiac CINE MRI. Results
show that the proposed approach estimates accurate
cardiac and respiratory gating signals from ECG-free
free breathing data and use these to achieve high
spatial and temporal quality in retrospectively
reconstructed CINE images.
|
4363. |
48 |
Fast, Free-breathing 3D T2
mapping at 3T in 5 min for Whole-Heart Myocardial BOLD MRI
Hsin-Jung yang1, Jianing Pang1,
Behzad Sharif1, Avinash Kali1,
Xiaoming Bi2, Ivan Cokic1, Diabao
Li1, and Rohan Dharmakumar1
1Cedars Sinai Medical Center, Los Angeles,
California, United States, 2Siemens
Medical Solutions, IL, United States
Myocardial BOLD CMR is an appealing alternative to
contrast-enhanced methods for the functional assessment
of coronary artery disease. While significant advances
have been made in BOLD CMR, limitations still exist. An
ideal BOLD CMR method would be able to overcome the
limitations by permitting acquisition of 3D myocardial
BOLD images as maps (T2 or T2*) within 5 minutes,
without the need to suspend breathing. In this work, we
developed a stack-of-stars k-space acquisition scheme,
which permits 100% acquisition efficiency, to construct
3D T2 maps with full LV coverage within 5 minutes. We
tested this approach in healthy human volunteers.
|
|
|
|
ELECTRONIC
POSTER SESSION ○ PULSE SEQUENCES & RECONSTRUCTION |
Dynamic Imaging
Wednesday 14 May 2014
Exhibition Hall |
11:00 - 12:00 |
|
|
|
Computer # |
|
4364. |
49 |
Free-breathing cardiac 3D
cine MRI at 3T using golden-ratio Cartesian radial sampling
and variable flip angle
Yoon-Chul Kim1 and
Krishna S. Nayak1
1Electrical Engineering, Univ. of Southern
California, Los Angeles, CA, United States
We demonstrate a continuous 3D balanced SSFP cardiac
cine imaging in humans at 3Tesla. The technique is based
on a golden-ratio Cartesian radial sampling with
isotropic spatial resolution. The SAR reduction is
achieved with a variable flip angle scheduling in which
the flip angle is linearly weighted based on the
distance from the k-space origin within the 2D phase
encoding plane. Results demonstrate adequate depiction
of the blood and myocardium borders, which allows for
quantification of the ventricular function.
|
4365. |
50 |
Randomized Golden Ratio
Sampling For Highly Accelerated Dynamic Imaging
Yinghua Zhu1, Yi Guo1, R. Marc
Lebel2, Meng Law3, and Krishna
Nayak1
1Electrical Engineering Department,
University of Southern California, Los Angeles, CA,
United States, 2GE
Healthcare, Calgary, Alberta, Canada,3Radiology
Department, University of Southern California, Los
Angeles, CA, United States
Compressed sensing has shown great potential in
accelerating dynamic contrast enhanced MRI. Conventional
Poisson-disc (PD) and Cartesian golden ratio (GR) radial
schemes on the ky-kz plane of the 3D k-space are
inefficient due to computation time and sub-optimal
sparsity, respectively. We propose a novel randomized GR
(RGR) sampling that is fast in sampling pattern
generation on an MRI scanner, and flexible in temporal
resolution selection in the reconstruction. We show and
compare the results from PD, GR and RGR in retrospective
studies using clinical DCE data. The proposed method
yields promising results for highly accelerated DCE-MRI.
|
4366. |
51 |
Variable Temporal
Resolution Reconstruction for Golden-Angle Radial Sparse
Parallel DCE-MRI
Robert Grimm1, Dominik Nickel2,
Jana Hutter1, Christoph Forman1,
Berthold Kiefer2, Joachim Hornegger1,
and Kai Tobias Block3
1Pattern Recognition Lab, FAU
Erlangen-Nuremberg, Erlangen, Germany, 2MR
Application Development, Siemens AG, Healthcare Sector,
Erlangen, Germany, 3Department
of Radiology, NYU Langone Medical Center, New York City,
New York, United States
Modern imaging techniques for Dynamic Contrast Enhanced
MR Imaging (DCE-MRI) can achieve high temporal
resolution by exploiting correlation between different
time-points in the reconstruction. In order to reduce
the vast number of images as well as the reconstruction
time while keeping the relevant clinical information, we
propose to use a variable temporal resolution for the
reconstructed time-points. Specifically, this is
implemented for Golden-Angle Radial Sparse Parallel
DCE-MRI and illustrated for prostate and liver imaging.
In these applications the time resolution is critical in
the initial phase after contrast injection and less
important for the pre-contrast and later phases.
|
4367. |
52 |
Very Rapid 4D Compressed
Sensing MR for Lung Imaging during Forced Expiration
Benjamin Paul Berman1, Abhishek Pandey2,
Zhitao Li2, Theodore Trouard3,4,
Isabel Oliva4, Diego R. Martin4,
Maria Altbach4, and Ali Bilgin2,3
1Applied Mathematics, University of Arizona,
Tucson, Arizona, United States, 2Electrical
and Computer Engineering, University of Arizona, Tucson,
Arizona, United States, 3Biomedical
Engineering, University of Arizona, Tucson, Arizona,
United States, 4Medical
Imaging, University of Arizona, Tucson, Arizona, United
States
Spirometry measurements during expiration are standard
for diagnosis of many lung diseases. However, these
measurements contain no spatial information. Highly
accelerated 4D MRI with compressed sensing can be used
to image the lungs during forced respiratory maneuvers.
Golden angle stack-of-stars view ordering is utilized to
distribute the data into undersampled temporal bins.
Total variation between neighboring frames, as well as
reference frames acquired during the same scan, provide
enough sparsity to reconstruct images with as few as 1
readout per slice per time, ie. 100x acceleration, ie.
46ms resolution.
|
4368. |
53 |
A Robust Free-breathing
Data Acquisition Method for Reduction of Respiratory Motion
Artifacts
Yongwan Lim1, Yeji Han1, and
HyunWook Park1
1Department of Electrical Engineering, KAIST,
Daejeon, Korea
In this abstract, a free-breathing data acquisition
method was proposed for retrospective reconstruction in
the abdomen. Based on a variable density sampling,
multiple signals of the same PE are equidistantly
acquired during a respiratory cycle and the consecutive
PE steps are randomly distributed. Thus, this scheme
prevented the adjacent PE lines from being densely
acquired at non-quiescent respiratory phases. The
proposed method was validated on a numerical simulation
and in-vivo experiments from five healthy volunteers.
The results showed high image quality comparable to the
conventional data acquisition methods, thereby achieving
reduction of respiratory motion artifacts.
|
4369. |
54 |
Resolution improvement of
3D DCE-MRI using dynamic CS with patch-based non-convex low
rank penalty
Huisu Yoon1, Dongwook Lee1, Seung
Hong Choi2, Sung-Hong Park1, and
Jong Chul Ye1
1Dept. of Bio & Brain Engineering, KAIST,
Dae-jeon, Korea, 2Radiology,
Seoul National University, Seoul, Korea
One of important applications of dynamic
contrast-enhanced (DCE) MRI is to observe brain tissue
dynamics. In this work, we applied a dynamic compressed
sensing (CS) with patch-based non-convex low-rank
penalty1 for 3D DCE-MRI to exploit temporal redundancy
of the dynamic images to improve the spatiotemporal
resolution of the conventional GRAPPA2 reconstruction.
Experiments show that the proposed method provided
improved spatio-temporal resolution than GRAPPA
reconstruction.
|
4370. |
55 |
k-t-EPI: k-t-undersampled
EPI acquisition and reconstruction in cerebral perfusion
Rebecca Ramb1, Elias Kellner1,
Iulius Dragonu1, Frederik Testud1,
Irina Mader2, Jürgen Hennig1,
Maxim Zaitsev1, and Bernd Jung1
1Dept. of Radiology, Medical Physics,
University Medical Center, Freiburg, Baden-Württemberg,
Germany, 2Dept.
of Neuroradiology, University Medical Center, Freiburg
Brain Imaging, Freiburg, Baden-Württemberg, Germany
Parallel imaging offers the potential to decrease
blurring and susceptibility artifacts in ssEPI
acquisitions by shortening echo train lengths, however,
at the expense of SNR. We propose k-t-EPI:
k-t-undersampled ssEPI acquisition with k-t-GRAPPA
reconstruction, in order to overcome SNR limitations.
The developed sequence with two acquisition strategies
and reconstruction is presented and applied in
first-pass cerebral perfusion measurements at reduction
factor R=4 and high spatial resolution. The gained
flexibility in increasing spatial and/or temporal
resolution by higher achievable reduction factors
requires further investigation, also in the context of
other applications such as diffusion or fMRI.
|
4371. |
56 |
Joint multi-coil and
low-rank constraints for accelerating FMRI data acquisition
using k-t FASTER
Mark Chiew1, Stephen M Smith1,
Thomas Blumensath2, and Karla L Miller1
1FMRIB Centre, University of Oxford, Oxford,
Oxfordshire, United Kingdom, 2IVSR,
University of Southampton, Southampton, Hampshire,
United Kingdom
Recently, we introduced the k-t FASTER method for
rank-constrained acceleration of FMRI data acquisition.
The method used an iterative hard thresholding with
matrix shrinkage algorithm (IHT+MS) for image
reconstruction, and showed robust recovery of FMRI
resting state networks at modest (4x) acceleration
factors using only rank constraints. Here, we introduce
an enhancement of the IHT+MS algorithm that includes
multi-coil information to improve the data-consistency
by increasing the effective number of measurements. The
multi-coil k-t FASTER method is demonstrated in 8-fold
under-sampled data, using joint rank- and
coil-constraints to recover k-t FMRI data with high
fidelity.
|
4372. |
57 |
Prior Data Assisted
Compressed Sensing - A Novel Strategy for Real Time Dynamic
MRI
Eugene Yip1, Jihyun Yun2, Keith
Wachowicz1, Zsolt Gabos1, Satyapal
Rathee1, and Gino Fallone1,2
1Department of Oncology, University of
Alberta, Edmonton, AB, Canada, 2Department
of Physics, University of Alberta, Edmonton, AB, Canada
Compressed Sensing (CS) can be beneficial to real time
MRI guided interventions by significantly improving
imaging frame rates. Spatial-temporal (k-t) CS can
increase the acceleration potential of conventional CS
but requires significantly longer reconstruction times.
We have devised a novel spatial-temporal CS imaging
strategy – Prior Data Assisted Compressed Sensing
(PDACS), that is capable of near real time
reconstruction (0.3s), and improves the reconstruction
accuracy of conventional 2D-CS by using pre-acquired
data to support reconstruction. In this work, we
demonstrated the effectiveness of the PDACS technique in
a lung tumour tracking study of cancer patients
undergoing free breathing.
|
4373. |
58 |
Vastly undersampled
time-resolved TOF MR angiography in mice with a prospective
3D radial double golden angle approach.
Aurélien Julien Trotier1, William Lefrançois1,
Emeline Julie Ribot1, Eric Thiaudière1,
Jean-Michel Franconi1, and Sylvain Miraux1
1CNRS UMR5536, RMSB, Bordeaux, Aquitaine,
France
3D time-resolved cartesian TOF MR Angiography is a
powerful method to assess blood flow velocity.
Nevertheless total acquisition time required can be
prohibitive. The purpose of this work was to develop a
3D TOF MRA based on radial projection trajectories. A
first golden angle is used to uniformly distributed
projections along time and a second golden angle to
obtain different trajectories between cine images. The
efficiency and flexibility (retrospective filtering) of
this method was performed on mice model at 7T and shown
an acquisition time reduction of at least a factor 4 in
comparison to cartesian sampling.
|
4374. |
59 |
Artifact Reduction in
Time-of-Flight Imaging at 7 T using Temporally Resolved
Compressed Sensing
Anders Garpebring1,2, Maarten J. Versluis1,3,
and Matthias J. P. van Osch1,3
1CJ Gorter Center for high field MRI, Leiden
University Medical Center, Leiden, Zuid-Holland,
Netherlands, 2Radiation
Sciences, Umeå University, Umeå, Sweden, 3Radiology,
Leiden University Medical Center, Leiden, Zuid-Holland,
Netherlands
High resolution time-of-flight angiograms are frequently
degraded due to pulsation artifacts. By acquiring the
data randomly and subdividing it based on the timing
relative to the cardiac cycle data suitable for
spatio-temporal compressed sensing can be obtained.
Results based on data from a 7 T scanner show that this
approach is successful in eliminating the pulsation
artifacts and that it in addition enables visualization
of vessel intensity changes and vessel motion.
|
4375. |
60 |
Accelerated lung MRI using
Low-Rank Decomposition: a prospective and simulation study
Manoj Kumar Sarma1, Stan Rapacchi1,
Peng Hu1, Daniel B. Ennis1, M.
Albert Thomas1, Percy Lee2,
Patrick Kupelian2, and Ke Sheng2
1Radiological Sciences, UCLA School of
Medicine, Los Angeles, CA, United States, 2Radiation
Oncology, UCLA School of Medicine, Los Angeles, CA,
United States
Respiratory motion has posed significant challenges in
lung cancer radiotherapy. For patients presented with
lung cancer, dynamic 2D lung MRI is a safe and robust
method to characterize internal organ motion. Since the
MR speed depends on the number of data points sampled in
a given time, under-sampling of the k-space is a
practical approach to shorten imaging time. Recently,
various compressed sensing techniques have been utilized
to accelerate imaging acquisition. In the study, the
combination of transform domain sparsity with rank
deficiency is used to reconstruct spatial-temporal lung
dynamic MRI data and its ability to track lung tumor
motion is examined.
|
4376. |
61 |
A Novel Spatial-Temporal
Adaptive Technique for Reconstruction of Dynamic MRI Series
Julia V Velikina1 and
Alexey A Samsonov2
1University of Wisconsin - Madison, Madison,
Wisconsin, United States, 2University
of Wisconsin - Madison, WI, United States
A novel method is proposed for image series
reconstruction from incomplete data that improves
performance of techniques relying on temporal basis
representation for dimensionality reduction. The
improvement is achieved by automated iterative partition
of FOV into several clusters with similar temporal
dynamics and choosing a different locally adapted basis
for each cluster. The spatially adaptive reconstruction
allows for better image representation and higher SNR.
|
4377. |
62 |
Optimized k-t Sampling
for Combined Parallel Imaging and Compressed Sensing
Reconstruction
Johannes F.M. Schmidt*1, Claudio Santelli*1,2,
and Sebastian Kozerke1,2
1Institute for Biomedical Engineering,
University and ETH Zurich, Zurich, Switzerland, 2Imaging
Sciences and Biomedical Engineering, King's College
London, London, United Kingdom
Combining parallel imaging and compressed sensing (CS)
has shown improved reconstruction performance as
compared to applying either of the two methods alone.
Sampling patterns are mostly designed to fully sample
the k-space center while randomly undersample higher
phase encodes. Trajectories combining regular and random
undersampling have been shown to improve reconstruction
accuracy. In dynamic imaging, time-interleaved k-t
sampling may be used to reduce aliasing in the spatial
temporal Fourier domain. We propose a k-t sampling
scheme combining time-interleaved regular and random
undersampling. Using cardiac short-axis data, it is
demonstrated that this approach improves image
reconstruction relative to standard CS trajectories.
|
4378.
|
63 |
Calibration Reduction for
Through-time radial GRAPPA by Weights Compression
Ozan Sayin1, Haris Saybasili2,
Mark Griswold3,4, Nicole Seiberlich4,
and Daniel A. Herzka1
1Department of Biomedical Engineering, Johns
Hopkins School of Medicine, Baltimore, MD, United
States, 2Siemens
Healthcare USA, Inc., Chicago, IL, United States, 3Department
of Radiology, Case Western Reserve University,
Cleveland, OH, United States, 4Department
of Biomedical Engineering, Case Western Reserve
University, Cleveland, OH, United States
Undersampled non-Cartesian trajectories permit high
acceleration factors for real-time acquisitions with
parallel imaging. Thus, accurate and efficient
calibration schemes for such methods are important.
Recently, a well-established parallel imaging technique
GRAPPA, originally proposed for Cartesian trajectories,
has been successfully extended to non-Cartesian imaging.
This was enabled via an improved calibration formalism
that extends the calibration to the time dimension
(through-time calibration), and can be implemented for
rapid imaging. The current study aims reducing the
number of calibration frames required, thereby speeding
up the real-time reconstructions significantly. A new
calibration method that includes compression of the
GRAPPA weights is proposed.
|
4379. |
64 |
Toward Robust,
Clinically-Practical Single-Breathhold 3D Cardiac Cine MRI
with High Acceleration and Rapid Online Reconstruction
Peng Lai1, Shreyas S Vasanawala2,
and Anja CS Brau3
1Global MR Applications & Workflow, GE
Healthcare, Menlo Park, CA, United States, 2Radiology,
Stanford University, Stanford, CA, United States, 3Global
MR Applications & Workflow, GE Healthcare, Munich,
Germany
3D cine MRI with high spatiotemporal resolution remains
challenging due to residual artifacts and temporal
flickering. Reconstruction for k-t accelerated 3D cine
with high-density coil poses high computation demand,
which is difficult for online processing. This work
developed a new variable-density random k-t sampling
scheme that produces less-disturbing noise-like
artifacts and can be further suppressed by denoising.
Also, this work combines a few newly developed
algorithms (e.g. coil compression and data decoupling
calibration) to address the computation challenge. The
proposed sampling scheme and reconstruction framework
improves the robustness of 3D cine with 9x acceleration
and enables rapid online processing.
|
4380. |
65 |
Does Temporal
Regularization Lead to Systematic Underestimation of
Ejection Fraction?
Stefan Wundrak1,2, Jan Paul1,
Johannes Ulrici2, Erich Hell2, and
Volker Rasche1
1Ulm University Hospital, Ulm, Germany, 2Sirona
Dental Systems, Bensheim, Germany
In clinical practice breath-hold ECG-synchronized cine
protocols remain the preferred method for the assessment
of the ejection fraction of the ventricles. Recent
research aims for real-time free-breathing CMR by
combining fast imaging se-quences with parallel imaging
and compressed sensing. However, recent work reports a
10% underestimation of the ejec-tion fraction by
real-time CMR. We reproduce these results with
golden-angle radial sparse SENSE and show that the
underestimation might be explained by the strong
temporal regularization that is needed to reconstruct
the highly under-sampled CMR images.
|
4381. |
66 |
Improved Blind Compressed
Sensing for Dynamic MRI Reconstruction
Angshul Majumdar1 and
Rabab Ward2
1Indraprastha Institute of Information
Technology, New Delhi, Delhi, India, 2Electrical
and Computer Engineering, University of British
Columbia, Vancouver, BC, Canada
This paper proposes an improvement over the recently
proposed Blind Compressive Sensing (BCS) framework for
dynamic MRI reconstruction. Owing to temporal
correlation among the frames, the Casorati matrix formed
by stacking the dynamic MRI frames as columns is a rank
deficient matrix. BCS fails to capture this rank
deficiency. We incorporate a rank deficiency penalty
into the BCS framework and thereby improve the
reconstruction results.
|
4382. |
67 |
Region adaptive motion
compensated dynamic CS for cardiac perfusion imaging
Huisu Yoon1 and
Jong Chul Ye1
1Dept. of Bio & Brain Engineering, KAIST,
Dae-jeon, Korea
One of important applications of dynamic
contrast-enhanced (DCE) MRI is to observe brain tissue
dynamics. In this work, we applied a dynamic compressed
sensing (CS) with patch-based non-convex low-rank
penalty1 for 3D DCE-MRI to exploit temporal redundancy
of the dynamic images to improve the spatiotemporal
resolution of the conventional GRAPPA2 reconstruction.
Experiments show that the proposed method provided
improved spatio-temporal resolution than GRAPPA
reconstruction.
|
4383. |
68 |
Motion Corrected Sparse
SENSE for highly accelerated Multi Slice cardiac CINE
Muhammad Usman1, David Atkinson2,
Gerald Greil1, Tobias Schaeffter1,
and Claudia Prieto1,3
1Division of Imaging Sciences and Biomedical
Engineering, King's College London, London, Greater
London, United Kingdom, 2Department
of Image Computing, University College London, London,
United Kingdom, 3Escuela
de Ingenieria, Pontificia Universidad Católica de Chile,
Santiago, Chile
In this work, we propose a novel method titled ‘Motion
Corrected Sparse SENSE (MC-SS) that can give motion
corrected reconstruction from free breathing data
acquired in scan duration of a single breath-hold.
Prospective multi-slice free-breathing golden radial
cardiac MR acquisitions of 2 minutes (10 sec per slice),
performed in 5 volunteers and 2 patients, demonstrate
the feasibility of MC-SS framework for highly
accelerated multislice CINE.
|
4384. |
69 |
Sparse Dynamic MRI with an
Adaptive Temporal Sparsity Prior for Cardiovascular Imaging
Stefan Wundrak1, Jan Paul1,
Johannes Ulrici2, Erich Hell2,
Sebastian Kozerke3, and Volker Rasche1
1Ulm University Hospital, Ulm, Germany, 2Sirona
Dental Systems, Bensheim, Germany, 3Institute
for Biomedical Engineering, University of Zurich and
Swiss Federal Institute of Technology, Zurich,
Switzerland
The application of compressed sensing presumes a
sampling scheme with incoherent, noise-like
undersampling artifacts. In practical cardiovascular MRI
this objective is usually not fully met. In particular,
the very inhomogeneous sensitivity profile of a
32-channel coil array leads to strong streak artifacts
around the chest-wall. In this work, the k-t radial
SPARSE SENSE reconstruction method is extended with a
regularization matrix Λ which adapts the temporal
regularization strength to the local magnitude of the
aliasing artifacts. The proposed method reduces the
residual aliasing artifacts with-out compromising the
temporal fidelity of the cardiac region.
|
4385. |
70 |
Sub-30ms real-time,
free-breathing cardiac cine with VISTA sampling and SPIRiT
reconstruction: A comparison with conventional segmented
cine
Samuel T Ting1, Yu Ding1, Hui Xue2,
Shivraman Giri3, Ning Jin3, Rizwan
Ahmad1, and Orlando P Simonetti1
1The Ohio State University, Columbus, OH,
United States, 2National
Heart Lung and Blood Institute, Bethesda, MD, United
States, 3Siemens
Healthcare, Chicago, IL, United States
We combine the Variable density Incoherent
Spatio-Temporal Acquisition (VISTA) sampling pattern
with the Fast Iterative Shrinkage Thresholding Algorithm
(FISTA) implementation of SPIRiT to achieve online
real-time, free-breathing cardiac cine imaging at sub
30ms temporal resolution. We test our method in six
healthy volunteers. Visual scoring compared to
conventional segmented techniques show little
degradation in artifacts, temporal fidelity, and image
quality. EDV and ESV measurements from segmented and
real-time data show mean differences of 2.20% and 3.83%
respectively. Reconstruction times of less than one
minute within the Gadgetron framework promise a
clinically practical implementation of this technique.
|
4386. |
71 |
Discrete shearlets as a
sparsifying transform in a split Bregman reconstruction of
low-rank plus sparse component from undersampled (k,
t)-space small bowel data
Nikolaos Dikaios1, Benjamin Tremoulheac1,
Alex Menys2, Simon Arridge1, and
David Atkinson2
1Dept. of Medical Physics and Bioengineering,
University College London, London, Great London, United
Kingdom, 2Centre
of Medical Imaging, University College London, Great
London, United Kingdom
Quantification of small bowel motility correlates with
disorders such as Crohn’s disease. The motility metric
can be derived from non rigid registration of dynamic MR
images, and its accuracy depends on their
spatial/temporal resolution. We propose a split Bregman
algorithm to reconstruct alias free dynamic MR images
from undersampled (k,t)-space data, improving either the
temporal resolution or maintaining the same temporal
resolution and improving the spatial resolution. The
proposed algorithm uses shearlets as an optimal
sparsifying transform, and assumes that the recovered
image consists of a low-rank plus a sparse component.
|
4387.
|
72 |
Investigations of upper
airway obstruction pattern in sleep apnea benefit from
real-time 3D MRI
Yoon-Chul Kim1, Biswas Joshi2,
Shirleen Loloyan2, Roberta Kato2,
Michael C.K. Khoo1, Sally L.Davidson Ward2,
and Krishna S. Nayak1
1Univ. of Southern California, Los Angeles,
CA, United States, 2Children's
Hospital Los Angeles, Los Angeles, CA, United States
Our group has recently developed a novel real-time 3D
MRI of the upper airway imaging which has the potential
to provide complete anatomical information of the
pharyngeal airway with sub-second temporal resolution
and <2 mm isotropic spatial resolution. We have applied
this technique to overweight and obese adolescents who
snore, and have been able to observe and classify the
patterns of upper airway narrowing and obstruction
during respiratory events such as central or obstructive
sleep apneas during natural sleep.
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ELECTRONIC
POSTER SESSION ○ PULSE SEQUENCES & RECONSTRUCTION |
Parallel Imaging
Wednesday 14 May 2014
Exhibition Hall |
11:00 - 12:00 |
|
|
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Computer # |
|
4388. |
73 |
Direct Virtual Coil for Fat
Fraction Quantification
Kang Wang1, James H Holmes1,
Shaorong Chang2, Philip J Beatty3,
Ann Shimakawa4, Lloyd Estkowski4,
Scott B Reeder5,6, and Ersin Bayram7
1Global MR Applications and Workflow, GE
Healthcare, Madison, WI, United States, 2MR
Engineering, GE Healthcare, Waukesha, WI, United States,3Physical
Sciences, Sunnybrook Research Institute, Toronto, ON,
Canada, 4Global
MR Applications and Workflow, GE Healthcare, Menlo Park,
CA, United States, 5Radiology,
University of Wisconsin-Madison, WI, United States, 6Medical
Physics, University of Wisconsin-Madison, WI, United
States, 7Global
MR Applications and Workflow, GE Healthcare, Houston,
TX, United States
Direct Virtual Coil (DVC) has been previously
demonstrated to be an efficient method to reduce
computation time for data-driven parallel imaging. It
has also been shown that DVC preserves phase
information, and is compatible with phase-sensitive
applications, such as 2-pt Dixon qualitative water-fat
separation. In this work, we demonstrate the feasibility
of DVC for quantitative fat fraction imaging.
|
4389. |
74 |
Quantification of imperfect
phase cycling in multi-band imaging: mathematical model and
proof of principle
Alessandro Sbrizzi1, Bjorn Stemkens2,
Sjoerd Crijns2, Cornelis A van den Berg2,
Jan J Lagendijk2, Peter R Luijten2,
Rob Tijssen2, and Anna Andreychenko2
1UMC Utrecht, Utrecht, NL, Netherlands, 2UMC
Utrecht, Utrecht, Netherlands
Multi-band based imaging techniques require phase
cycling between the different slices when the
sensitivity maps are not sufficiently distinct. The
phase cycling has the effect of shifting the image by a
fraction of the FOV. The phase difference is therefore
fundamental for the successful application of this kind
of techniques. In previous studies, the negative effect
of signal leakage and cross talk between simultaneously
excited slices has been shown. In this work, we show
that inter-slice leakage can be partially caused by an
imperfect phase cycling and we derive a mathematical
model to quantify it. Based on the model, correction of
imperfect phase cycling could be done.
|
4390.
|
75 |
Evaluation of multiband EPI
acquisitions for resting state fMRI
J Gabriel Castrillon1, Valentin Riedl1,2,
Martin Bührer3, and Christine Preibisch1
1Neuroradiology, Klinikum Rechts der Isar,
Technische Universität München, München, Bayern,
Germany, 2TUM-Neuroimaging
Center, Klinikum Rechts der Isar, Technische Universität
München, München, Bayern, Germany, 3Gyrotools,
Zurich, Switzerland
This work evaluates the results of r-fMRI analysis when
different multiband factors are used in data
acquisition. Four subjects were scanned on a Philips
Ingenia 3 T using a 32 channel head coil. Multiple
r-fMRI data were acquired for 7 min using four protocols
with different multiband factors. Even though the
temporal SNR decreases as could be expected from the
heavily undersampled data combining a SENSE factor of 2
with multiband factors up to 4, the mean z-values and
spatial representation of the four investigated networks
were remarkably stable. Multiband EPI technique could
become a new standard in (r-)fMRI.
|
4391. |
76 |
A Combination of Linear and
Nonlinear GRAPPA with Variable Density Sampling
Xinran Zhong1,2, Jingyuan Lyu2,
Chuangjian Cai1, Kui Ying3, and
Leslie Ying2
1Department of Biomedical Engineering,
Tsinghua University, Beijing, Beijing, China, 2Department
of Biomedical Engineering, University at Buffalo,
Buffalo, NY, United States, 3Department
of Engineering Physics, Tsinghua University, Beijing,
Beijing, China
Recently a novel algorithm called nonlinear GRAPPA is
proposed to improve the SNR with high acceleration
factors. However, nonlinear GRAPPA usually requires more
ACS lines, which limits the net acceleration factor that
can be achieved. In this abstract, we present a method
that combines the advantage of GRAPPA and NL-GRAPPA to
achieve even higher net reduction factors than GRAPPA
and NL-GRAPPA alone. Experimental results demonstrate
that the proposed method is able to achieve a high
reduction factor of 3.76 in 2D imaging without
significant SNR loss/artifacts.
|
4392. |
77 |
Optimal auto-calibration
kernel estimation using double adaptive weights
Enhao Gong1 and
John M Pauly1
1Electrical Engineering, Stanford University,
Stanford, CA, United States
The estimation of GRAPPA and SPIRiT auto-calibration
kernel, which is usually formed as an inverse problem,
is an essential step for Parallel Imaging (PI).
Regularizations for the kernel coefficients have been
discussed before to achieve more accurate kernel
estimation. However, the weighting for each measurement
in the inverse problem has not been fully investigated.
In this work, we propose a novel scheme for
auto-calibration PI, which consider both measurement and
kernel coefficients to achieve an optimal solution under
a statistical model. Experiments compared with previous
proposed calibration methods demonstrated advantages in
kernel value estimation and reconstruction accuracy.
|
4393. |
78 |
A general Hierarchical
Mapping Framework (HMF) for coil compression
Stephen F Cauley1, Berkin Bilgic1,2,
Jonathan R Polimeni1,2, Himanshu Bhat3,
Lawrence L Wald1,4, and Kawin Setsompop1,2
1A.A. Martinos Center for Biomedical Imaging,
Dept. of Radiology, MGH, Charlestown, MA, United States, 2Harvard
Medical School, Boston, MA, United States, 3Siemens
Medical Solutions Inc, Malvern, PA, United States, 4Harvard-MIT
Division of Health Sciences and Technology, Cambridge,
MA, United States
High channel-count array coils have enabled accurate
parallel imaging (PI) reconstruction at very high
acceleration factors. However, the computational scaling
of many PI algorithms leads to long reconstruction
times. Methods such as SVD are applicable to a wide
range of k-space sampling patterns but produce poor
image quality. Other improved methods such as
Geometric-decomposition Coil Compression are tailored
for Cartesian sampling. In this work, we introduce a
Hierarchical Mapping Framework (HMF) for coil
compression that improves upon previously proposed
algorithms. The additional flexibility provided by HMF
should enable accurate PI reconstruction for many
acquisition types.
|
4394. |
79 |
Three-Nearest-Neighbor
Alignment for Smooth ESPIRiT Maps
Dara Bahri1, Martin Uecker1, and
Michael Lustig1
1Electrical Engineering and Computer
Sciences, University of California, Berkeley,
California, United States
ESPIRiT is a subspace-based method that estimates coil
sensitivity maps from calibration data. It produces maps
where only the relative phase is known. Often, the phase
of a single coil is used as reference, which can result
in non-smooth phase. This is problematic for
phase-sensitive applications and compressed sensing as
it reduces the sparsity of the image. In this work we
propose a technique for determining basis vectors for
ESPIRiT maps which are smoothly aligned in space. In
addition to producing smooth phase in the maps, it
prevents mixing of signal components as might occur when
imaging a tight FOV.
|
4395. |
80 |
Parallel Reconstruction
using Patch based K-space Dictionary Learning
Zechen Zhou1, Jinnan Wang2,3,
Niranjan Balu3, and Chun Yuan1,3
1Center for Biomedical Imaging Research,
Tsinghua University, Beijing, China, 2Philips
Research North America, Seattle, Washington, United
States,3Radiology, University of Washington,
Seattle, Washington, United States
Recently, a parallel reconstruction technique SAKE has
been developed using Singular Value Decomposition (SVD)
to impose low rank property for calibrationless parallel
reconstruction, which can improve the result of SPIRiT.
We hypothesize that a learned dictionary rather than SVD
method can better adapt to acquired data and improve the
reconstruction result. In this study, we propose a new
patch-based dictionary learning method to estimate the
local signal features in k-space and demonstrate its
improved performance in-vivo.
|
4396. |
81 |
RO extended FOV
SENSE/GRAPPA for multiband imaging with FOV shift
Steen Moeller1, An T Vu1, Edward
Auerbach1, Kamil Ugurbil1, and
Essa Yacoub1
1Center for Magnetic Resonance Research,
University of Minnesota, Minneapolis, Minnesota, United
States
The use of the SENSE/GRAPPA algorithm in combination
with multiband imaging using shifted FOV is established
as feasible. Comparison with the conventional
slice-GRAPPA algorithm is considered and the effect on
different datatypes is investigated, with some datatypes
exhibiting poor performance using the slice-GRAPPA
algortihm
|
4397. |
82 |
Characterization of
autocalibration methods for accelerated EPI reconstructions
using GRAPPA
Jonathan Rizzo Polimeni1, Kawin Setsompop1,
and W. Scott Hoge2
1Athinoula A. Martinos Center for Biomedical
Imaging, Department of Radiology, Harvard Medical
School, Massachusetts General Hospital, Charlestown, MA,
United States, 2Department
of Radiology, Brigham and Women’s Hospital and Harvard
Medical School, Boston, MA, United States
It has been recently demonstrated that phase errors
across segments of multi-shot EPI data used for GRAPPA
calibration can have a dramatic impact on image quality,
causing severe SNR loss and ghosting/aliasing artifacts.
Here we characterize several proposed calibration
methods in terms of artifact level and tSNR to determine
to what extent calibration data should match image data.
We find that the ideal calibration data must match the
accelerated EPI data in terms of phase errors and
geometric distortion to provide high quality GRAPPA
reconstructions. Target audience: Clinicians/researchers
using accelerated echo planar imaging, especially in
high-field or high-resolution applications.
|
4398. |
83 |
Auto-calibrated multiband
imaging
Andrew S. Nencka1, Daniel L. Shefchik1,
Andrew M. Huettner1, and Andrzej Jesmanowicz1
1Department of Biophysics, Medical College of
Wisconsin, Milwaukee, WI, United States
An auto-calibrated multiband acquisition technology is
presented. Hadamard unaliasing is used in a time series
acquisition to generate reference images for subsequent
SENSE unaliasing of the same data. This abstract offers
an empirical optimization of the number of repetitions
to use for generating reference images. In an ideal
case, the full time series should be used for reference
image generation, but system instabilities lead to an
optimal window width for a given set of acquisition
parameters and imaging hardware.
|
4399. |
84 |
Analogy of
phase-constrained parallel MRI formulations
Martin Blaimer1, Marius Heim2,
Daniel Neumann1, Peter M. Jakob1,2,
and Felix A. Breuer1
1Research Center Magnetic-Resonance-Bavaria
(MRB), Würzburg, Bavaria, Germany, 2Department
of Experimental Physics 5, University of Würzburg,
Würzburg, Bavaria, Germany
One major drawback of parallel MRI (pMRI) is the noise
amplification due to the reconstruction process. The
noise amplification originates from the formulation of
pMRI as an inverse problem. Phase-constrained algorithms
achieve a significant SNR improvement by constraining
all elements of the solution to be real-valued. In the
original formulation, the SENSE reconstruction problem
is split into real- and imaginary parts and is referred
to as phase-constrained SENSE. An alternative
formulation utilizes conjugate k-space symmetry by
generating additional virtual coils. The purpose of this
work is to demonstrate by mathematical analysis and
imaging experiments that both formulations are
equivalent.
|
4400. |
85 |
Accelerating SENSE-type MR
image reconstruction algorithms with incremental gradients
Matthew J. Muckley1,2, Douglas C. Noll1,2,
and Jeffrey A. Fessler1,2
1Biomedical Engineering, University of
Michigan, Ann Arbor, MI, United States, 2Electrical
Engineering and Computer Science, University of
Michigan, Ann Arbor, MI, United States
Algorithms that minimize SENSE-type image reconstruction
cost functions almost always compute the gradient of a
data consistency term at each iteration of the
algorithm. Incremental gradient methods approximate the
full gradient of the data consistency term by computing
the gradient using a subset of the data. Since these
subset gradients require less computation time, using
them as a proxy for the full gradient significantly
accelerates convergence. The method is general enough to
be applied to any MR image reconstruction problem
involving multiple receive coils with a SENSE model.
Four-fold acceleration is shown with a low rank plus
sparse model.
|
4401. |
86 |
Parallel Imaging for
Sliding Interleaved Cylinder (SLINCY) Acquisition
Kie Tae Kwon1, Bob S Hu2, and
Dwight G Nishimura1
1Electrical Engineering, Stanford University,
Stanford, California, United States, 2Palo
Alto Medical Foundation, Palo Alto, California, United
States
A sliding interleaved cylinder (SLINCY) acquisition
employs a 3D concentric cylinders trajectory as the
readout instead of a 3DFT sequence. Due to the helical
sampling geometry of the trajectory and the
sliding-nature of the acquisition scheme, a dedicated
parallel imaging strategy is required for SLINCY to
achieve a clinically feasible scan time. In this work,
we developed a new parallel imaging strategy for SLINCY,
which decomposes the 3D helical structure of SLINCY into
a series of 2D Cartesian planes. We demonstrated that
the proposed parallel imaging strategy is feasible for
SLINCY, which reduced the scan time down to almost 50%.
|
4402. |
87 |
Calculating G-factor Maps
from PROPELLER SENSE Reconstruction
Yuchou Chang1, James G. Pipe1, and
Michael Schär1,2
1Neuroimaging Research, Barrow Neurological
Institute, Phoenix, Arizona, United States, 2Philips
Healthcare, Cleveland, Ohio, United States
In Cartesian SENSE parallel imaging the g-factor
measures the noise propagation due to ill-conditioning
of the matrix inversion during the reconstruction. To
the best of our knowledge, the g-factor of SENSE images
acquired with the PROPELLER method has never been
studied. In this abstract, we propose a method to
directly calculate g-factor map for SENSE reconstruction
with PROPELLER trajectories and compare it to a
Monte-Carlo simulation. In comparison with Cartesian
imaging, experimental results demonstrate that the
proposed method provides a useful tool for identifying
noise behavior in PROPELLER SENSE and is computationally
feasible in practice.
|
4403. |
88 |
Multislice Acquisition With
Incoherent Aliasing (MICA)
Kangrong Zhu1, Robert F. Dougherty2,
John M. Pauly1, and Adam B. Kerr1
1Electrical Engineering, Stanford University,
Stanford, CA, United States, 2CNI,
Stanford University, Stanford, CA, United States
In conventional simultaneous multislice (SMS)
acquisitions, such as CAIPIRINHA and blipped-CAIPI, the
simultaneously excited slices alias coherently, because
these SMS acquisition techniques repeatedly sample the
DFT encoding frequencies in the frequency spectrum of
the simultaneous slices. In this work, we describe a new
SMS acquisition approach called 'Multislice acquisition
with InCoherent Aliasing (MICA)', which uses irregular
encoding in order to create incoherent aliasing of the
simultaneously excited slices. We demonstrate the
feasibility of using MICA for SMS imaging through
simulation and in vivo experiments. Our preliminary
results show that the performance of MICA is comparable
to CAIPI.
|
4404. |
89 |
Geometric-decomposition
Coil Compression for Real-time Simultaneous MultiSlice EPI
reconstruction at high MultiBand factors
Stephen F Cauley1, Micheal Lustig2,
Berkin Bilgic1,3, Himanshu Bhat4,
Lawrence L Wald1,5, and Kawin Setsompop1,3
1A.A. Martinos Center for Biomedical Imaging,
Dept. of Radiology, MGH, Charlestown, MA, United States, 2Electrical
Engineering and Computer Sciences, UC Berkeley, CA,
United States, 3Harvard
Medical School, Boston, MA, United States, 4Siemens
Medical Solutions Inc, Malvern, PA, United States, 5Division
of Health Sciences and Technology, Harvard-MIT,
Cambridge, MA, United States
Simultaneous MultiSlice EPI acquisition significantly
increases the temporal efficiency for both
diffusion-weighted imaging and functional MRI. With the
Blipped-CAIPI modification and a large channel-count
receive coil array, high resolution whole brain images
are obtained in sub-second with little SNR penalty and
artifact level. However, this breakthrough poses a
challenge for the rapid reconstruction of these large
datasets; a critical criteria for high patient
throughput in clinical and research settings. We use
Geometric-decomposition Coil Compression to ameliorate
the computational challenges associated with SMS-EPI
acquisitions at high MB factors. This enables real-time
reconstruction of large datasets using vendor's provided
computational hardware.
|
4405. |
90 |
Assessment of cardiac time
intervals using high temporal resolution real-time spiral
phase contrast with UNFOLD-SENSE
Grzegorz Tomasz Kowalik1, Daniel Steven
Knight1,2, Jennifer Anne Steeden1,
Oliver Tann1,3, Freddy Odille4,5,
David Atkinson6, Andrew Taylor1,3,
and Vivek Muthurangu1,3
1UCL Institute of Cardiovascular Science,
London, United Kingdom, 2Royal
Free Campus, UCL Division of Medicine, London, United
Kingdom,3Cardiorespiratory Unit, Great Ormond
Street Hospital for Children, London, United Kingdom, 4IADI,
INSERM, Nancy, France, 5Université
de Lorraine, Nancy, France, 6Centre
for Medical Imaging, UCL Division of Medicine, London,
United Kingdom
The abstract presents the image reconstruction technique
that combines parallel imaging (SENSE) and temporal
encoding (UNFOLD) techniques for very high temporal
acquisitions (~15 ms). The reconstruction was tested and
used for the assessment of cardiac function.
|
4406. |
91 |
Adaptive Coil Combination
Using a Body Coil Scan as Phase Reference
- permission withheld
Vladimír Jellúš1 and
Stephan A.R. Kannengiesser1
1MR Applications Development, Siemens AG,
Healthcare Sector, Erlangen, Germany
Combining images from multi-channel coils is challenging
with respect to maximizing signal-to-noise ratio (SNR),
providing an image phase for phase-sensitive techniques,
and avoiding artifacts. This work combines advantages of
two previously proposed groups of techniques: coil
sensitivity estimations based on a separate calibration
prescan including the body coil, and adaptive
combination based on the image data themselves. The
approach is to use the former for phase correction,
prior to application of the latter. High quality,
artifact free combined images with smooth phase can be
achieved robustly and efficiently.
|
4407. |
92 |
A Fast Optimal Method for
Coil Sensitivity Estimation and Adaptive Coil Combination
for Complex Images
Souheil J Inati1, Michael S Hansen2,
and Peter Kellman2
1National Institute of Mental Health,
National Institutes of Health, Bethesda, MD, United
States, 2National
Heart Lung and Blood Institute, National Institutes of
Health, Bethesda, MD, United States
We propose a simple, SNR optimal method for coil
sensitivity estimation and adaptive combination suitable
for applications in which complex valued images are
required. The proposed method enforces smoothness in
both the magnitude and phase of the estimated coil
sensitivities and overcomes the limitations inherent in
previous methods. It has a very fast implementation and
can be easily incorporated into a reconstruction
pipeline. We demonstrate how this approach can mitigate
the problems with phase. It is likely to be useful in
applications such as susceptibility weighted imaging,
complex interpolation, complex motion correction, and
referenceless thermometry.
|
4408. |
93 |
Wavelet-space Parallel
Imaging for Fast MRI
Yu Li1
1Radiology, Cincinnati Children's Hospital
Medical Center, Cincinnati, OH, United States
We developed a novel parallel imaging technique that
performs image reconstruction in wavelet space. Since
wavelet space is undersampled, aliasing exists in
reconstructed images. However, if this aliasing is well
controlled, aliasing-free images can be generated from
inverse wavelet transform. Compared with conventional
image- or k-space reconstruction, wavelet-space
reconstruction provides better performance for aliasing
suppression and noise control in imaging acceleration.
|
4409. |
94 |
Optimal reconstruction
using receive arrays for hyperpolarized 13C
cardiac imaging at 3T
William Dominguez-Viqueira1, Angus Z Lau2,
Albert P Chen3, and Charles H Cunningham1,4
1Physical Sciences, Sunnybrook Research
Institute, Toronto, Ontario, Canada, 2University
of Oxford, United Kingdom, 3GE
healthcare, Toronto, Ontario, Canada, 4Medical
Biophysics, University of Toronto, Toronto, Ontario,
Canada
Rapid multislice imaging of hyperpolarized 13C pyruvate
was demonstrated by using a single-shot spiral
pulse-sequence with up to 5-channel receiver-coils. SNR
and coverage can be increased by using multi-channel
reception as presented before; but final images are
biased by the coil sensitivity when a simple
sum-of-squares channel combination was used. In this
work coil sensitivity coefficients were numerically
calculated in Matlab and used for optimal linear
combination reconstruction with in vivo measurements.
SNR improvements of up to a 100 % in areas closer to the
base of the heart were demonstrated by using the optimal
reconstruction, as compared with sum-of-squares.
|
4410. |
95 |
Body-Coil-Constrained
Estimation (BoCCE): joint estimation of signal and coil
sensitivities from weighted, under-sampled k-space
measurements using a novel sampling strategy and associated
reconstruction algorithm
M. Dylan Tisdall1,2
1A. A. Martinos Center for Biomedical
Imaging, Massachusetts General Hospital, Charlestown,
Massachusetts, United States, 2Radiology,
Harvard Medical School, Boston, Massachusetts, United
States
We show initial results with a novel reconstruction
algorithm and small modification to previous
undersampling strategies used in parallel imaging. Our
novel algorithm constrains the coil sensitivities to be
compact in the Fourier domain, and uses a small set of
samples acquired with the body coil to further constrain
the solution space. We demonstrate high-quality
magnitude and phase images can be estimated from 3D
FLASH with at least 7x reductions in scan time.
|
4411. |
96 |
2D-SENSE for Simultaneous
Multi Slice Imaging
Benjamin Zahneisen1, Rasim Boyacioglu2,
Thomas Ernst1, and Benedikt A. Poser3
1School of Medicine, University of Hawaii,
Honolulu, HI, United States, 2Donders
Institute for Brain, Cognition and Behaviour, Radboud
University, Nijmegen, Netherlands, 3Maastricht
University, Maastricht, Netherlands
Simultaneous multi-slice (SMS) imaging has recently
gained in popularity, especially for 2D single-shot
sequences like EPI. Established reconstruction
techniques for SMS acquisitions are SENSE/GRAPPA or
“slice-GRAPPA” when CAIPIRINHA is used. With a few
exceptions, most SMS reconstructions require a two-step
approach to first disentangle the aliased slices, and
then perform in-plane parallel reconstruction, or vice
versa. We propose a 2D-SENSE reconstruction as a general
one-step approach to reconstruct SMS data with
arbitrarily undersampled Cartesian k-space (CAIPI-like
patterns) in phase and/or slice directions. In case of
additional in-plane undersampling it provides an
easy-to-implement, contrast independent, one-step
reconstruction along both undersampled dimensions.
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